Runella slithyformis: Runsl_1321
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Entry
Runsl_1321 CDS
T01553
Name
(GenBank) type III restriction protein res subunit
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
rsi
Runella slithyformis
Brite
KEGG Orthology (KO) [BR:
rsi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rsi03009
]
Runsl_1321
03012 Translation factors [BR:
rsi03012
]
Runsl_1321
Enzymes [BR:
rsi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
Runsl_1321
5.6.2.5 RNA 5'-3' helicase
Runsl_1321
Ribosome biogenesis [BR:
rsi03009
]
Eukaryotic type
Other ribosome biogenesis factors
Runsl_1321
Translation factors [BR:
rsi03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
Runsl_1321
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
AAA_12
AAA_30
AAA_19
Viral_helicase1
ResIII
Helicase_RecD
UvrD-helicase
DEAD
PhoH
SLFN-g3_helicase
UvrD_C_2
AAA_22
Herpes_ori_bp
AAA_16
PIF1
T2SSE
AAA_25
nSTAND3
AAA_24
HEM4
DAP3
DUF7247
ABC_tran
ATPase
TraI_hel_assoc_N
SRP54
NPHP3_N
ATPase_2
AAA_7
AAA_5
AAA_28
Flavi_DEAD
AAA
AAA_14
DnaB_C
cobW
Motif
Other DBs
NCBI-ProteinID:
AEI47748
UniProt:
A0A7U4E4S7
LinkDB
All DBs
Position
complement(1523146..1525056)
Genome browser
AA seq
636 aa
AA seq
DB search
MEYFKKLLDLLKIEREEDHNQYRKLTEQSSVAERRANGLTWYPVAIRGSEMSRGDYLTVE
LERTTHQDIAHQFRFGMPAVFFCNHDAKNDRVEGTITHQNGNRLKITLRTDELPEWSRDG
KLGIDVLFDDNSYEEMQSALKQAMAVLEKSTNEPATRLAAILTGEKKPTFKEQAPFYSTP
SLNPSQQSAVDSILRANELAVVHGPPGTGKTTTLVQAIKALVKTENQKVLVVAPSNTAVD
LLSEKLHEEGLNVLRVGNPARVTERLTALTLDSKMAEHPYMKEAKRLKKQAQELKAMAHK
YKRSFGKSERDQRKLLFVEAHRIMKEVGNTEQYIIDDLLVKAQVVTATLVGSNHYTVREV
RYHTVVIDEAGQALEPACWIPVLKAQKVILAGDHCQLSPTIKSEVAAKGGLSTTLLEKCV
DAHPEAVTLLEEQYRMNEQIMGYSSQIFYQHKLKAHASVAHRVLFTDDKPVLFIDTAGCG
FEEKLEGTSSTNPEEAALLLKHLGLLTAEWEAQKTDTSFPSIAIIAPYKQQIHVLAEQLS
HVPELQPYLAHMAVNTVDSFQGQERDVVYISMTRSNSEGSIGFLADIRRMNVAMTRARKK
LVVVGDSATLAQFPFYADFISYAERLDAYLSAWELI
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atggagtactttaaaaaactgcttgatttattaaaaattgaacgtgaagaagatcataat
caataccgtaaacttacggagcagtcgtcggtggcggagcgccgggccaacggcctgacg
tggtatccggtggccattcgagggtcggaaatgagccggggggattacctgacggtcgaa
ttggaacgcactacgcatcaggatattgcacaccaatttcgatttggaatgcccgccgtg
tttttttgtaatcacgacgccaaaaatgaccgggtcgaaggcaccataacgcatcaaaac
ggcaatcgcctgaaaataacgctgcgtactgacgaattgccggagtggtcacgcgatgga
aagctgggcattgatgtgctttttgacgacaacagttacgaagaaatgcaatcggcctta
aaacaggcgatggcggtattggaaaaaagtaccaacgagcctgcgacacggttagcggct
attttgacgggagagaaaaagccgacctttaaggagcaggcacctttttacagtacccca
agtcttaatccttcgcagcaatcggccgtcgacagcattttgcgggccaatgaactggcc
gtagtacacggtcctccgggtacgggcaagaccactaccctggtgcaggccatcaaagca
ttggtaaagactgaaaatcagaaagtattggtagtggcgccgagcaatacggccgtggat
ctgctgagtgagaagctgcacgaagaaggccttaacgtgttgcgtgtcggcaatcctgcc
cgcgtgaccgaacgcttaacggcgctgacgctcgacagtaaaatggccgaacacccttac
atgaaagaagccaaacggctcaaaaagcaggcacaggagttgaaagccatggcccacaaa
tacaagcgcagttttggcaaatcagaacgcgaccaacgtaagctgctgtttgtcgaagcg
caccggatcatgaaagaggtgggcaacaccgagcagtacatcattgacgacctgttggtc
aaagcgcaggtggtcacggctacgttggtgggctccaatcactacaccgtcagagaggtg
cggtatcataccgtcgtgattgatgaggcaggtcaggcgctggagcctgcctgctggatt
cctgttctgaaagcccaaaaagtgattctggcgggtgaccattgtcaattatctcccacg
ataaaatcagaagttgcggcaaagggaggattgagtactacgttgcttgaaaaatgcgtc
gacgcgcatcctgaggcggtgacattgctggaagaacaataccgcatgaatgagcaaatc
atgggctattcgtcccaaatcttttatcaacataagctcaaagcgcacgcttcggtggcg
catcgggtgctttttacggacgataaacccgtattgttcattgatacagccggttgtggt
tttgaagaaaaattggaaggcaccagcagcaccaatcccgaagaagctgcgttattactc
aaacatcttgggctgctcaccgccgaatgggaggcgcaaaaaacggatacatcgtttccg
agtattgccattattgccccgtataaacaacagatccacgtgctcgctgagcaactcagc
cacgtacccgagttgcagccgtacctcgcccatatggccgtcaataccgtcgacagcttt
caggggcaggagcgggatgtggtctacatcagcatgacccgcagtaacagcgagggaagc
atcggttttttggcagacattcggcgcatgaacgtagccatgacccgcgcccgtaaaaaa
ctggtagtggtgggcgatagcgccaccctggcgcagtttccgttttatgccgattttatt
tcctatgccgaacggctggatgcttacctaagcgcctgggagttgatttga
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