Runella slithyformis: Runsl_1396
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Entry
Runsl_1396 CDS
T01553
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rsi
Runella slithyformis
Brite
KEGG Orthology (KO) [BR:
rsi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsi03400
]
Runsl_1396
Enzymes [BR:
rsi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Runsl_1396
DNA repair and recombination proteins [BR:
rsi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Runsl_1396
Prokaryotic type
Runsl_1396
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AEI47822
UniProt:
A0A7U3ZIG2
LinkDB
All DBs
Position
complement(1586399..1587709)
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AA seq
436 aa
AA seq
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MHTPLTLFWFRRDLRLHDNAGLYHALKSGNPVLPVFIFDTEILDKLEDKKDRRVEFIHEA
IRELHTQLTQLGSTLIVRYGKPADIWQQLSEEYDIAEVHTNHDYEPYALVRDKAIGAFLN
AGGTAFYTHKDQCIFEKSEILSGAGTPYTVFTPYSRKWKEKVNEFYLRSYPTETYFEAFF
KTKPLEIPSLQRMGFEATGQPFPSKTVRNELIEHYKERRDIPSIPGTSRLSVHLRFGTIS
IRELARKAQTLNETFLNELIWRDFYMQILWHFPHVGQGKAFRPEYDKIEWRHDEKQFQQW
CEGRTGYPIVDAGMRELNATGFMHNRVRMVVASFLTKHLLIDWRWGEAYFAQKLLDYDLS
ANNGGWQWASGSGTDAAPYFRIFNPASQTQKFDPQHIYIKKWVPEINSFEYPQPIVDHAF
ARERCLKVYQKALKGL
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgcacacccctcttacgcttttttggtttcgtcgcgatttgcgcttacacgataacgcc
gggctttaccatgccctcaaatcgggaaacccggtgttgcctgtatttatttttgatacc
gagattctggataaattagaagacaaaaaagaccggcgggtggaatttattcatgaggct
atccgtgagcttcatacgcaattaacgcagctcggcagtaccctcatcgtcagatacggc
aagccggcagatatctggcagcagctttcggaggagtatgatatcgccgaagtccacacc
aatcacgattacgaaccctacgcactcgtgcgtgataaagccatcggtgcttttttgaac
gccgggggaacggccttttacacccacaaagaccagtgtatttttgaaaaaagcgaaata
ctgagcggtgcgggaacgccctataccgtttttacgccgtacagtcgtaagtggaaagaa
aaggtcaatgagttttacctgcgttcgtacccgacagaaacgtattttgaggcgtttttc
aaaaccaaaccgttggagattccctcactccaacgcatgggatttgaagcaacgggccaa
ccgtttccgtcgaaaacagtacgcaatgaactcattgagcactacaaagaacgccgcgac
ataccgtcgattccgggcacttcgcggttgagcgttcacctgcgattcggtacgatctcc
atccgggagttggcccgtaaagcccaaacgctgaacgaaacctttctgaatgagctcatt
tggcgggatttttacatgcagattctctggcattttccgcacgtggggcagggaaaagcc
ttccggcccgagtatgacaaaattgaatggcgacacgatgagaaacagtttcaacaatgg
tgtgaagggcgcacgggttacccgattgtggatgccggcatgcgcgaactcaacgccacg
gggtttatgcacaaccgcgtccggatggtggtggcgagctttctgaccaaacacctgctc
attgactggcgttggggcgaggcctattttgcccaaaagctattggattatgacctgtcg
gccaacaacggcggttggcagtgggcgtcgggctccggtacggatgccgccccttacttt
cggatttttaatcctgcttcacaaacgcagaagtttgaccctcagcatatttacatcaaa
aaatgggttcccgaaatcaacagctttgagtatcctcaacccatcgttgaccatgcgttt
gcgcgggagcggtgcttgaaagtgtatcaaaaggcgttgaagggcctataa
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