Runella slithyformis: Runsl_1471
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Entry
Runsl_1471 CDS
T01553
Name
(GenBank) DNA repair protein recO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
rsi
Runella slithyformis
Pathway
rsi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rsi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Runsl_1471
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsi03400
]
Runsl_1471
DNA repair and recombination proteins [BR:
rsi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Runsl_1471
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Runsl_1471
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
HisK-N-like
Motif
Other DBs
NCBI-ProteinID:
AEI47896
UniProt:
A0A7U3ZIL5
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All DBs
Position
complement(1673557..1674252)
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AA seq
231 aa
AA seq
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MLHKTRGIVLNYIRYRETSIIVKIYTEDFGIQSYIVNGIRSAKSKTNRIALFQPLTLLDL
VVYHKNKEQTIHRLAEVKCSLPFRSLPFDFVKSSIALFETEMLVKTLREEEANPPLFHFL
MEGIIFLEEANEHFENFHLQFLAKFAFYLGFGAETVHEMEQQLKENLYPHTLDALAREAM
QNLILMPFEYPLSLDRQRRGKLLDTLLFYFKIHLEGLGEIRSLEVLRELMR
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgctccacaaaacacgcggtattgtcctcaattatattcgctaccgcgaaacttccatt
attgttaaaatttacaccgaagattttgggattcaaagctacatcgtcaacggcatccgc
agtgccaagtccaaaaccaatcgcattgcgctctttcaaccgctcactttattggacctg
gtggtttatcataaaaataaagagcaaaccattcatcgcctggcagaagtaaagtgtagt
ttgccgtttcggagtttaccttttgattttgtcaaatcaagcattgcgctgtttgagacc
gaaatgctggtcaaaaccttgcgcgaagaagaagccaacccgccgctgtttcattttttg
atggaaggaatcatctttttggaagaggccaacgaacattttgagaattttcatctccaa
tttttggcaaaatttgccttctatttgggttttggggccgaaaccgtccatgagatggag
caacagctcaaagaaaatctctatcctcatacgcttgatgcactcgcgcgcgaggccatg
caaaatctcattttgatgcctttcgaatatcctctgtcattggatcggcagcgaagagga
aagttgctggatacccttcttttttacttcaaaattcatttggaaggactgggtgagata
cgatcgctggaggtgctgcgggaattgatgcgatga
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