Runella slithyformis: Runsl_1674
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Entry
Runsl_1674 CDS
T01553
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rsi
Runella slithyformis
Pathway
rsi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rsi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Runsl_1674
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsi03021
]
Runsl_1674
03400 DNA repair and recombination proteins [BR:
rsi03400
]
Runsl_1674
Enzymes [BR:
rsi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Runsl_1674
Transcription machinery [BR:
rsi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Runsl_1674
DNA repair and recombination proteins [BR:
rsi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Runsl_1674
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
AEI48098
UniProt:
A0A7U3ZJ13
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All DBs
Position
complement(1905669..1906658)
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AA seq
329 aa
AA seq
DB search
MSILAFQMPDKVVMEKADDFHGLFEFKPLEKGFGVTIGNALRRILLSSLEGYAITSVRFP
SVLHEFSSIEGVVEDVTEIVLNLKMVRFKKVSEMVDNKITVSVKNQSVVTAGDIAKFTSS
FQVLNPDLVICHIDDQMTFEMEILIEKGRGYVPADEPRNQELPIGHIPIDAIYTPIKNVK
YSVENTRVEQKTDYEKLLIEVSTDGSIHPEEALKGAAYILIQHFMLFSDQTMTFETQKND
EVSEVDEEMLRMRKLLKTPLADLDLSVRAYNCLKSADIKTLGDLVKLEVADMMKFRNFGK
KSLTELEQLVAEKNLVFGMDVVKYRLDED
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgtctattttagcattccaaatgcccgacaaagtcgtaatggaaaaagccgacgatttt
cacgggttgtttgagttcaagccactggagaaaggtttcggtgtaaccattggaaatgcg
ttgcgtcgtattttactttcatcgttggaaggctatgccatcaccagcgtgagatttccc
agtgtgctccacgaattttcttcgattgaaggagttgtggaagatgttaccgaaatcgtg
ctgaaccttaagatggttcgctttaaaaaggtttcggaaatggttgataacaaaattacg
gtgagtgttaaaaaccaatcggtggtgacagcaggcgatatcgctaagtttacatcatca
ttccaggttttgaatcccgatttagttatttgccacattgacgaccaaatgacatttgag
atggaaatcttgattgaaaaaggtcgtggttatgtacccgctgatgaaccgcgcaatcag
gaattacccattgggcacattcctattgatgcgatttacacacccatcaaaaatgttaag
tacagcgttgaaaatacgcgcgttgaacagaaaactgactacgaaaaactgttaattgag
gtgtcaacggatgggtcaatccacccggaagaagcattgaaaggcgcagcttacattttg
attcagcactttatgttgttctcagatcaaacaatgacgtttgagactcagaaaaatgac
gaagtaagcgaggtagatgaagaaatgctgcgtatgcgcaaacttctgaaaacaccactt
gctgaccttgatttgtcagttcgtgcttacaactgcctcaaatcagctgatatcaagacc
ttgggcgacctggtaaaacttgaagtagccgatatgatgaagttccgtaatttcggtaaa
aaatcacttactgaattggaacaacttgtcgctgagaaaaatctggtattcggtatggat
gttgtgaagtaccgtttggatgaggactaa
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