Runella slithyformis: Runsl_1889
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Entry
Runsl_1889 CDS
T01553
Name
(GenBank) Ribosomal protein S12 methylthiotransferase rimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
rsi
Runella slithyformis
Brite
KEGG Orthology (KO) [BR:
rsi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rsi03009
]
Runsl_1889
Enzymes [BR:
rsi01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
Runsl_1889
Ribosome biogenesis [BR:
rsi03009
]
Prokaryotic type
ribosomal protein modification factors
Runsl_1889
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
FIMP
DUF3755
Motif
Other DBs
NCBI-ProteinID:
AEI48313
UniProt:
A0A7U4E5L4
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All DBs
Position
2148987..2150294
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AA seq
435 aa
AA seq
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MKTKGTKKNKVNIVTLGCSKNLVDSENIFTQLKGNGYNVSHESKKDDAGIVIVNTCGFID
NAKQESIDTILRYADAKEAGLVDKVYVTGCLSHRYKDELALEIPTVDAWFGTNELPRLLK
TLKADYKQELVGERLLTTPAHYAYLKIAEGCDRPCSFCAIPLMRGGHVSRTIDDLVIEAK
SLARRGTKELILIAQDLTYYGLDIYKKRNLSELLNHLSDVEGIEWIRLQYAYPSGFPMDV
LDVMRERSNICKYLDMPLQSGSTELLKLMRRGITREKTEDLIKTIRDKVPGIALRTTLIA
GHPGETEEIFEETLEFVERTRFDRLGVFTYSHEEQTFSHTLPDDIPAEVKQQRADDIMAV
QQDISWSLNQAKIGNTYKVLFDRKESGYFVGRTEFDSPEVDNEVLLPASQFVRQGDFAHV
KITNAEEFDLYGELV
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccaaaggaaccaagaagaataaagtcaatatcgtgacgctgggctgcagtaaa
aacctggtcgacagcgaaaatattttcacccaactcaaaggcaacggctataacgtttcg
cacgaatctaaaaaagacgatgccggcattgtgatcgtgaatacgtgcggatttatcgac
aacgccaagcaggaatccatcgacaccattttgcgctacgccgacgccaaagaagcggga
ttggttgacaaagtgtacgtaacgggctgtttatcacatcgctacaaagatgaattggcg
cttgaaatcccaaccgtagatgcttggtttggcaccaatgaattgcctcgcctgctcaaa
acccttaaagccgattacaaacaggaactcgttggtgagcgcctgttgacgacgcccgcc
cattacgcttacctcaaaatcgccgaaggctgcgaccgtccgtgcagtttttgcgcgata
ccgctcatgcgcggcgggcacgtttcgcggacgattgacgatttggtcattgaagcaaaa
tctttggcacgtcgtggcaccaaagaactgattttgattgcccaggatttgacgtactac
gggttggatatatataaaaaacgtaatttatcggagctgttgaatcatctttccgacgtg
gaaggcatcgaatggattcgtttgcaatacgcttatccgtcgggttttccgatggatgta
ttggatgtaatgcgtgagcgttccaatatttgcaaatacttggacatgccgctgcaaagc
ggcagtacagaattgttgaaattgatgcgtcgcgggattacgcgggaaaaaacggaagat
ttaatcaaaaccattcgtgataaagtacccggtattgcgctgcgtactacgctgatcgcg
ggccacccgggcgaaacggaagaaatctttgaagaaaccttagaatttgtagagcgcacg
cgtttcgatcgtttgggcgtatttacgtactcacacgaagagcaaaccttctcgcatacc
ctacccgatgacattcctgccgaagtaaaacagcaacgtgcggacgacattatggccgtg
cagcaggatatttcatggtcgctgaaccaagccaagatcggtaatacctataaagtgctg
tttgatcgaaaagagagcggctactttgtgggcagaacggagtttgactctcccgaagtg
gataatgaagtgttgctgccggcaagtcaatttgtgcgtcagggcgattttgctcacgta
aaaatcaccaatgcggaggagtttgatctgtacggagaattggtgtaa
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