Runella slithyformis: Runsl_1925
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Entry
Runsl_1925 CDS
T01553
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rsi
Runella slithyformis
Pathway
rsi00061
Fatty acid biosynthesis
rsi00071
Fatty acid degradation
rsi01100
Metabolic pathways
rsi01212
Fatty acid metabolism
rsi02024
Quorum sensing
rsi04146
Peroxisome
Module
rsi_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rsi00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Runsl_1925
00071 Fatty acid degradation
Runsl_1925
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Runsl_1925
09145 Cellular community - prokaryotes
02024 Quorum sensing
Runsl_1925
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rsi01004
]
Runsl_1925
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rsi04147
]
Runsl_1925
Enzymes [BR:
rsi01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Runsl_1925
Lipid biosynthesis proteins [BR:
rsi01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Runsl_1925
Exosome [BR:
rsi04147
]
Exosomal proteins
Exosomal proteins of breast milk
Runsl_1925
Exosomal proteins of breast cancer cells
Runsl_1925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
AEI48347
UniProt:
A0A7U3ZJF2
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All DBs
Position
2206412..2208091
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AA seq
559 aa
AA seq
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MKTTPVSDPTALKIFMDYFYHWEKTQPEKIFLRQPFGHRFNDFTWKETGNQVRRLASYLL
SLNLAPKSPIGLVSKNCAEWIIADLAIMMAGQVSVPFYPTLTGPQLHQVLSHSGCVVLFV
GKLDDWPGMKTGVPADVSCISFPNYNPDPEHIQWKDILASRQPLKESPLPELNDLFSIIY
TSGTTGNPKGVMLTYQAVASAMAATKDILRFDLPETRFFSYLPLCHIAERNIVEATCIGT
GGTIYFAESLDTFAQNLAQARPTHFLAVPRIWTKFQLGILAKMPQRKLDLLLKIPFISGM
VRKKIREGLGLNEAELILTGAAPMPASLIVWFRRLGIKIQEAYGMTENLGAVCMTPRNKP
KDGTVGKIYPGVEVKILPDTGEILTRSDWTMKGYYKEPKMTAETIDEEGWIHTGDVGELD
SEGYLKITGRVKEMYKTSKGEYVAPAQIEFGFADNKLIDQICVVGQRLPQPIALVVLSEM
ARRVEREAVAQSLEATLTDLNPKLKSYERVRKIVVMRDAWTVDNNMLTPTLKTRRNVIEK
NYDQMIEPWYEGKGNVIWE
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacgacgccggtttctgatccgacagcgctcaaaatcttcatggattatttttac
cattgggaaaaaacgcagcctgaaaagatttttttgcgtcagcctttcggtcatcgcttc
aacgattttacctggaaggagaccggaaatcaggtcagacgactggcgtcgtatcttttg
tcgctgaatttggcaccgaagagccccattgggctggtctccaaaaattgtgcggaatgg
atcatagcagacctggccattatgatggcagggcaggtgtcggtgccgttctatcctacg
cttaccgggccgcaattgcatcaggtgctgagccacagcgggtgtgtcgtcctgtttgtc
ggaaagttggacgattggccgggaatgaagacaggagtgccggcggatgtgtcctgcatc
tcttttccaaactataatcctgacccggagcacatacagtggaaagacatccttgcttcc
cgtcagccgttgaaggaatctcctttgccggagctcaacgatttgttttccattatttat
acctccgggaccacaggcaaccccaaaggcgtcatgctgacctatcaagcggtggcctcg
gccatggcggccaccaaagacatcctgcggtttgatttgcccgaaacccgctttttttcg
tatttgcccctgtgccatattgccgagcgcaacatcgtagaagctacctgtatcggtacc
ggcgggaccatctattttgccgaatcgctggatacatttgcccaaaatctggcgcaggca
cggcccacgcattttttagcggtgccgcgcatctggaccaagtttcagttgggaatactg
gcaaaaatgccgcagagaaagctggacctgttgctgaagatccccttcatcagcggtatg
gtcagaaaaaaaatccgtgaagggctcggtctcaatgaggcggaactgatcttaacgggc
gcggcacctatgccggcatcattgattgtatggtttcgacgtttagggattaagattcag
gaagcctacggaatgaccgaaaatctgggggctgtctgcatgacgccccgcaacaaaccc
aaagacggaaccgttgggaaaatatatcccggtgttgaagtaaagatcctgccggatacc
ggcgagatcctgacccgttcggattggactatgaaaggctattataaagagccaaaaatg
accgcagagaccattgatgaagaaggatggatacacaccggcgatgtgggtgagttggac
agtgaaggctacctgaaaatcacgggccgtgtcaaagaaatgtataaaacatcaaagggc
gaatatgtggctcctgcgcagattgagtttggctttgccgacaataaactgattgatcaa
atttgtgttgtcgggcagcgtttaccccaacccattgccctggtcgttttgtcagaaatg
gcccgaagggttgaacgtgaggcagttgcgcaaagcctggaggccacgctcaccgacctg
aaccctaaacttaaatcctacgaacgcgtacgaaagatcgtggtcatgagagatgcctgg
acggtggacaataatatgcttacccctacgcttaaaaccaggcgaaatgtcattgaaaag
aactatgatcaaatgatagagccatggtatgagggaaagggaaatgtcatttgggaataa
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