Runella slithyformis: Runsl_2476
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Entry
Runsl_2476 CDS
T01553
Name
(GenBank) TonB-dependent receptor plug
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
rsi
Runella slithyformis
Brite
KEGG Orthology (KO) [BR:
rsi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rsi02000
]
Runsl_2476
Transporters [BR:
rsi02000
]
Other transporters
Pores ion channels [TC:
1
]
Runsl_2476
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
CarbopepD_reg_2
CarboxypepD_reg
CILP
MetallophosN
Motif
Other DBs
NCBI-ProteinID:
AEI48881
UniProt:
A0A7U4E5S6
LinkDB
All DBs
Position
complement(2847923..2850940)
Genome browser
AA seq
1005 aa
AA seq
DB search
MKNMYNLLPPKWLLWSFLLGGALLLSPEAASASVRGTVKTADKTVAGRVTDATTNEPLAG
CSVVIKGTQKGTNTDANGSYTLVVPDDKAVLVFGFIGYEKQEIIVGARNSVDASLKSSAS
DLAQVVVIGYGSTTKKDMTGSVKSLKATDFNKGIINSPEQLLQGKVAGVNVTSASGEPGG
AQSITIRGPGGVRTGSTPLFVIDGMALDNSGTGGAINPLTFLNPQDIESIDVLKDASATA
IYGSRGANGVVLITTKKGKAGFSNLTFSSNVGISTMARALDVFTADEYRKQVPAVGGVLE
DLKANTDWQKEVTRTAYTQNHNLSFGGGADKLTYYASLGLQNQEGILKNSQLNRYSGRIN
VNQKLLNDRLSIDVNLNASSTLNERPPFGAMLGGAISANPTYPAYDANGEPFRYASGINP
LIPLKLEKDITKTNRVIGNISPSFTIIKGLVYKLNFGIDNSNSVRDLQSLPNAVPLQDGR
LETIYTYNNNKLIENYLTYTLNQTDHNLSALVGHSYQKIFVQGRSNSINKFPISGIEPIY
NPGLGQELTLANNKPGGYAVINELQSFFSRVNYQYKDRYLMTATVRADGSSKFGSNNKYG
VFPSFSVGWRLSEESFMKSLPFSDLKLRAGWGKTGNQEIPSKITQALFTSQVSGTTSYPL
YATGPYAPGTSYSRLANPNIQWEVSTQTDIGLDFGLFNGALSGTIDYFNKLSNNILLEVI
PADPVQPAGTFWTNVADMNIRNQGLELELNYRHIGTNGLRFDIGGNVTFIKNKVTNSPYS
VIPSGAASGSGLTSATINGYINNQPIGTFYLKQFTGFDDKGISTFLDADGDGIVTDKDRV
AAGSALPTKQFNFNTSIAYKGLDLVANFNGVSGNKLYDNTANANFYKLRLSKGINTTAEA
IAAPNESVNNAAPVSTRYLKDGAFFRLNNLSLGYNINTKALGINQWIAGIRVSATAQNLF
VITKYDGYDPEVNTDRTINGVSSYGIDYLSYPKAKSLIFGLNVTF
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatatgtacaacttactgcctccaaaatggcttttatggtcctttttgctgggg
ggagctttgctgctttcaccggaagcggccagtgcttcggtacggggcaccgtaaaaacc
gctgacaaaaccgtggccggacgtgtcacggatgccacaaccaatgaaccattggccggg
tgcagcgtcgtgatcaaaggaacgcaaaaaggcaccaataccgacgcaaacggctcgtat
acattggtcgttcccgatgacaaagccgtgttggtctttgggtttatcggctacgaaaaa
caggagatcatcgtcggggcccgcaactcagtagatgcctctcttaaatcaagtgcttct
gaccttgcgcaggtggtggtcatcgggtacggcagcaccacgaaaaaagatatgacgggc
tccgtcaaatcccttaaagccactgattttaacaaagggatcatcaactctcccgagcag
cttttgcagggaaaagtagcgggggtcaacgtcacttccgccagcggcgagccgggcggt
gcccaatccatcaccatccggggtccgggcggagttcgtacgggcagtacgcctctgttt
gtcatcgacggaatggccctggacaactccggcaccggtggtgccatcaacccgctgacg
tttctgaacccgcaggatattgagtccatcgacgtgctgaaagatgcttcggctaccgct
atttatggctcacgcggggcgaatggagtggtactcatcaccacgaaaaaaggcaaagcc
gggttttccaatcttaccttttcttccaacgtcggaatctcgaccatggcccgcgcactc
gacgtctttacggccgatgagtaccgtaagcaggtacctgccgtgggtggtgtgctggaa
gatctgaaagcaaataccgattggcaaaaagaagtaacccgtacggcctatacccaaaac
cataacttatcgtttggcggcggcgccgataaactgacgtattatgcgtcattgggcctg
caaaatcaggaaggtattttaaagaacagtcagctcaaccggtattcaggtcgtatcaat
gtcaatcaaaaattgctgaacgatcgcctgagcattgatgtaaatttaaatgccagctct
accttaaatgagcgtccgccatttggcgcaatgctgggcggggccatttccgccaatcct
acctatccggcctatgatgccaatggggagcctttcagatacgccagcggcatcaacccg
cttattccgctcaagttggaaaaagacattaccaaaaccaaccgggtcatcggtaatatc
tcaccatcgtttaccattatcaaaggattggtgtataaactcaatttcggtatcgacaat
tccaactccgtacgtgacctgcaatctttgcccaatgcagtgccgttgcaggatggccgc
ctcgagaccatctatacctacaacaacaacaaactgatcgaaaactacctgacgtatacg
ttgaaccaaaccgaccacaacctttcggcattagtaggacattcgtaccaaaaaatattt
gtgcagggacgcagcaacagcatcaataaattcccgatctccggcattgagccgatctac
aaccccggccttggccaggaactgacattggccaataataagccgggcggttatgcggtg
attaacgaattgcagtcgttcttttcgcgggtcaattaccaatacaaagaccgctatctg
atgacggccaccgtacgggccgacggttcttccaaattcggttccaacaacaaatacggg
gtattcccttcgttttcagtaggttggagactttcggaagaatcgttcatgaaatcactg
ccattcagcgatttaaaactgcgggccggttggggaaaaacggggaatcaggaaatcccg
tccaaaatcacgcaggcgttgtttacctcgcaggtatccggcaccaccagctacccgctg
tatgccaccggcccgtatgctccgggcacttcgtactcgcgcctggccaaccccaacatt
cagtgggaagtatccacccagaccgacatagggcttgatttcggcctgttcaacggagca
ttgtccggaaccatcgactatttcaacaaactgtccaataatattctgctggaagtcatc
ccggctgacccggttcagccggccggtacgttctggaccaatgtggccgatatgaacatt
agaaaccaaggcttggagttggaattgaattatcgtcatatcggcaccaatggcctgcgc
tttgacattggcggtaacgtaacgttcatcaaaaataaagtaacgaactctccttattcc
gtgattccttccggcgcggcctccggttcgggcctcacttcggccaccatcaacggttac
atcaataatcagcccatcggtaccttttacctcaaacaattcacaggctttgatgataaa
ggcatcagcacttttctggatgccgacggcgacggtatcgtgaccgacaaagaccgcgta
gcagcaggaagtgcactgcccaccaagcagttcaacttcaatacaagcattgcctacaaa
ggactcgatctggtagccaactttaacggtgtatccggcaacaagctttacgacaacacc
gctaacgccaacttttataaactgagactgtcgaaagggatcaacaccaccgctgaagcc
attgcggcccccaatgagtcggtcaacaacgccgctccggtatcaacgcgctacctgaaa
gacggtgcgttcttccgcctgaacaacctttcgttaggatacaacataaacaccaaagcc
cttggcatcaaccaatggatcgcgggcattcgggtctcggccacggctcaaaatttattc
gtgatcaccaagtatgatggctatgaccccgaagtaaataccgaccggaccatcaacggg
gtttcgtcttacggaatcgactacttaagttatcccaaagctaaatcactcatttttggt
ttgaacgttacgttttaa
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