Runella slithyformis: Runsl_2510
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Entry
Runsl_2510 CDS
T01553
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rsi
Runella slithyformis
Pathway
rsi03420
Nucleotide excision repair
rsi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rsi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Runsl_2510
03430 Mismatch repair
Runsl_2510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsi03400
]
Runsl_2510
Enzymes [BR:
rsi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Runsl_2510
DNA repair and recombination proteins [BR:
rsi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Runsl_2510
MMR (mismatch excision repair)
Other MMR factors
Runsl_2510
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
AAA_12
ResIII
DGKD_4H
DEAD
DUF8012
Motif
Other DBs
NCBI-ProteinID:
AEI48914
UniProt:
A0A7U4E678
LinkDB
All DBs
Position
2899056..2901389
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AA seq
777 aa
AA seq
DB search
MTGYLSGLNEPQAQAVTHGEGPLMIIAGAGSGKTRVLTLRIAHLIENGVDPFRILSLTFT
NKAAGEMRERIEKVVGFEARNIWMGTFHAVFAKILRIEARYLGYTSDFSIYDTDDSKSLI
KSIVKELNLDDKTYKPNVVFNRISGAKNNLISADDYLANKLFRADDEAAKLPEIGRLYKA
YTTRCFQANAMDFDDLLYNTNVLFRDFPEVLNKYQHKFQYVLVDEFQDTNVAQYLITRKL
AAVHRNIAVVGDDAQSIYAFRGANIQNILNFEKDFPEVKVVKLEQNYRSTQTIVNAANSV
IARNKAQLKKNVFTANEEGVLIDVVKASSDNEEGRLIASAIFEEKVNKGLRNTDFAILYR
TNAQSRSFEEALRRQNIKYRIIGGLSFYQRKEIKDLLAYLRFVVNQSDEEAFKRIINLPK
RGIGDTTVAKIAVTAAENQVPVWEVVSNITKYISGRAAMPIESFAILIKSFKLLIEEGKD
AYTVAAHVAKTSGILKELYEDKTVEGLSRYENVQELLNAIKEFVDNADNEDKTISSFLQT
VSLLTNADESDDGDTDRVTLMTIHGAKGLEFKNVYVVGLEEGLFPSQMMLEKREDLEEER
RLFYVAITRAENKLTFSYAESRYNWGRLNMCEPSRFLYEVDQRFLTTSKGRRSGGFDDYR
NNVEPTAMNFIRKPSGTSGSVQKPSSEGSPTTPASRLSSGQRPSTQATSVPQSASTDFVA
SDTSTLEEGNRVEHSKFGKGTVKKMDINGTDRKAVIQFDTVGEKTLLLSFAKLRILR
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgacaggttatttaagcgggttgaacgaaccacaggcgcaggccgttacgcacggcgaa
gggcctttgatgattattgcgggagcgggttcgggaaaaacgcgtgtgctgaccctgcgg
attgcacaccttatcgaaaacggcgttgatccttttcggattttgtcgttgacctttact
aacaaagcagcgggtgaaatgcgcgagcggatcgagaaagtagttggttttgaggcccgt
aacatttggatgggaacctttcacgccgtctttgccaaaatcctgcgcatcgaagcgcgt
tatttgggctatacttccgacttttctatctatgataccgacgattcaaaatcgctcatc
aagagcatcgtcaaagagctgaatctggatgataaaacctacaaaccgaatgtcgtcttt
aaccgtatttcgggcgcaaagaacaacctgatctcggcagacgattacctggccaataaa
ctgttcagagccgacgacgaagccgccaaacttcccgagatcgggcgattgtataaagcc
tatactacgcgttgttttcaggccaacgccatggattttgatgatctgctgtataatacc
aacgtactgtttcgcgattttcccgaagtgctgaataaataccaacacaaatttcagtac
gtattggtggatgagtttcaggataccaacgtagcccagtacctcattaccagaaagtta
gcggcggtacatcgcaacattgccgtcgtgggcgacgatgcccaaagtatctacgccttt
cgcggagccaatattcagaatatcctgaatttcgaaaaagatttccctgaagtaaaagtg
gtcaagttggagcaaaattaccgttccactcaaaccattgtcaacgcggctaattcggtc
attgcccgcaataaagcgcagttgaagaaaaatgtgtttacggccaacgaagaaggggtg
ctgattgatgtcgtaaaagcgagttcggacaacgaagaagggcggttgattgcctcggcg
atttttgaagaaaaagtaaacaagggcctgcgcaatactgattttgccattttgtaccgc
accaacgcccaatcgcgttcctttgaagaagcccttcgccggcaaaatatcaagtaccgc
atcattggcggactgtcgttttaccaacgaaaagaaatcaaggacctgctggcctatctg
cggtttgtggtgaatcaaagcgacgaagaggcgtttaagcgaattatcaatttgcccaaa
cgcggtatcggcgatacgaccgtggccaagatcgcggtaacggccgccgaaaatcaggtg
ccggtttgggaagtggtttccaacattaccaaatacatttcaggacgggcagcgatgccg
atcgaaagttttgccatccttatcaagagttttaaattattgatcgaagaaggaaaagat
gcgtacaccgtggcggcacacgtggccaagacgtcaggtatcctgaaggaattgtacgaa
gataaaaccgtcgaaggcttgagccgctacgaaaacgtgcaggaattgctgaatgccatc
aaggaatttgtggataacgctgacaatgaagacaaaaccatcagctcatttctgcaaacg
gtttcgctgctgaccaacgctgacgaatcggacgatggcgataccgaccgcgtcacgctc
atgacgattcacggagccaagggcctggaatttaagaatgtgtacgtggtaggattggaa
gaagggctgtttcccagccaaatgatgctcgaaaaacgcgaagatctggaagaagaacgt
cgactgttttacgtggccatcacccgcgccgaaaataaactgactttttcctacgccgaa
agtcgctacaattgggggcgactgaatatgtgtgagccaagccgttttttatacgaagta
gaccaacgtttcctgactacttccaaaggacgccgttcgggaggttttgacgattatcgc
aacaatgtcgagccgaccgcgatgaactttattcggaaaccttccggtacttccggcagt
gtacaaaaaccgagcagtgaaggaagtcccaccacgccggccagtcgattgtcgagcggg
cagcggccttctacgcaggcaacgagcgtaccgcagtcggcttctaccgattttgtggcg
agcgatacttccacgttggaagaaggcaaccgggtagagcactctaagtttgggaaagga
accgtgaagaaaatggacatcaacggcaccgaccgcaaagccgtgattcagtttgatacc
gtcggcgaaaaaacgctgttgctgagctttgcaaagctgcggattttacggtaa
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