Runella slithyformis: Runsl_2625
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Entry
Runsl_2625 CDS
T01553
Name
(GenBank) glycoside hydrolase family 29 (alpha-L-fucosidase)
KO
K01206
alpha-L-fucosidase [EC:
3.2.1.51
]
Organism
rsi
Runella slithyformis
Pathway
rsi00511
Other glycan degradation
rsi04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
rsi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
Runsl_2625
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
Runsl_2625
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rsi04147
]
Runsl_2625
Enzymes [BR:
rsi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.51 alpha-L-fucosidase
Runsl_2625
Exosome [BR:
rsi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
Runsl_2625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha_L_fucos
F5_F8_type_C
F5_F8_type_C_2
GHL6
Motif
Other DBs
NCBI-ProteinID:
AEI49025
UniProt:
A0A7U3ZKR5
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All DBs
Position
3041563..3043281
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AA seq
572 aa
AA seq
DB search
MKKSLMILLFFLIAFQGFSQKTISKEQRLKWWQDAKMGLFIHWGPVSLIGKEISWSRNGY
GKSKYDSLYLRFNPGQFNAKEWVKLAKAGGMKYLVLTSKHHDGFCLFDTKTTSYNIMNSP
FGRDVCKELAQAAHEAGMPIGWYFSVADWKDPDCRNPKTNAVFADRVEQQVRELLTNYGK
ISLLWIDYEGSPSPIHPKRVFDLARTLQPEIIINNRLEPFNPDESHARVGAYADYATPEG
FVAGYGAVPWETCTNMGHQWAWRFNDTPRSLKESVHTLLRCVGGNGNLLFNIGPDSSGVF
PPDFAARATEMGDWLRKNAEAVYQTKGGVYTPSKDYVSSYRGNKLYLHLLNNTGDEIKLP
PMAAKVKKASFLNGKAVSFTQTKADVTLKIPQNGRDSIATIVAITLDKPAAPLGQIIPFT
TTNSWAYGKKASASSALGQFLHDPSAAFDDNPATFWKMGRRTDVDFEAYYGKDLHYQSEA
AFNLFQNKGWLEVDLGTKQTVKQLKVSESVYQKSQIKRFEIQYEKEGQWLTLAQDEKMGN
WSKDISPVTAQKFRLVILDSYGYAGIREFQLF
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagtcattaatgattctcttgtttttcctgattgcttttcagggttttagtcaa
aaaaccatttctaaagagcagcgcttaaagtggtggcaagacgccaaaatgggcttattt
atccactgggggcctgtttcgttgatcggaaaggaaatcagttggtcgcggaatggctac
ggtaaaagtaagtacgattcgttgtatctgaggtttaaccccgggcaattcaacgccaaa
gaatgggtgaagctggccaaagccggcggaatgaagtacttagtgctgacttccaagcac
cacgacggattttgcctctttgataccaaaaccacgtcttacaacatcatgaacagcccg
tttggacgggatgtatgtaaagagcttgcccaagcggcccacgaagcggggatgcctatc
ggctggtatttttcggtggccgattggaaagaccccgattgtcgcaacccgaaaaccaac
gctgtttttgccgatcgggtagaacagcaggtgcgcgaattgttgaccaactatggcaag
atcagtttgttatggatcgattacgaaggctcacccagcccgatccaccccaaaagagtg
tttgatctggcgcgcactttgcagcccgaaatcatcatcaacaaccggctcgaacccttc
aatcctgacgaatcgcacgcgcgggtgggggcgtatgccgactatgctacgcccgaaggt
tttgtggcgggttacggcgcggtgccttgggaaacctgcaccaacatggggcatcagtgg
gcgtggcggttcaacgatacgccccggagtttgaaagaatcggtgcataccctgcttcgt
tgcgtgggtggaaacggcaatcttctgttcaacatcggccccgacagctcgggcgttttt
ccacccgattttgccgcccgtgccacggagatgggcgattggctgcgcaaaaatgcggaa
gccgtttaccaaactaaaggaggtgtgtatacaccgtcaaaagactacgtaagttcgtac
cgaggcaacaaactgtatctgcatctattgaacaatacgggcgatgaaatcaagctcccg
cccatggcggctaaggtcaaaaaagcgtcttttttaaatggaaaggccgtttcttttacg
caaaccaaagcggatgttacgttaaaaatcccccaaaacgggcgagattccatcgcgacc
attgtggcgattacgctggataagcccgctgctccattgggacagatcatcccttttaca
accaccaattcatgggcgtacggcaaaaaagcgagtgcttcgagtgcgttggggcagttt
ttgcacgatccatccgctgcttttgacgacaaccccgctactttttggaaaatggggcgt
cgtaccgacgtggactttgaggcgtattacggaaaagacctgcattatcaatcagaagcg
gctttcaatttatttcagaacaaaggctggctggaagtagacctgggcacaaagcaaacg
gttaagcagcttaaagtgagtgaatcggtgtatcagaaatctcagatcaaacgctttgaa
attcagtacgaaaaagagggccaatggctgacactggcgcaggatgaaaaaatgggcaat
tggagtaaagatatcagccccgtgacggcccaaaagtttcgcctggtgattctggattcg
tatggctatgcgggaatcagggagtttcagctgttttga
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