Runella slithyformis: Runsl_2900
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Entry
Runsl_2900 CDS
T01553
Name
(GenBank) Polyprenyl synthetase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
rsi
Runella slithyformis
Pathway
rsi00900
Terpenoid backbone biosynthesis
rsi01100
Metabolic pathways
rsi01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rsi00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
Runsl_2900
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
rsi01006
]
Runsl_2900
Enzymes [BR:
rsi01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
Runsl_2900
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
Runsl_2900
2.5.1.29 geranylgeranyl diphosphate synthase
Runsl_2900
Prenyltransferases [BR:
rsi01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
Runsl_2900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
AEI49288
UniProt:
A0A7U4E6I5
LinkDB
All DBs
Position
3374508..3375485
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AA seq
325 aa
AA seq
DB search
MTFQPYLEAISTQIQHTAYGEEPTELYEPIRYIMSLGGKRLRPLLTVLSANLFIDDWQKA
LKPAIAVEVFHNFTLMHDDIMDCAPLRRGKPTVHEKWNANTAILSGDVMLVNAYELLLDV
APAQLPRVIKRFNRTAAEVCEGQQLDMNFETRTDVSQEEYIGMIRLKTSVLLGFAMELGG
IIAGADEATTQLLYDAGVNMGLGFQLKDDLLDVYGDPEKFGKQVGGDIIANKKTFMLIEA
LLLAEGKTKEALNYWLSLEQGSYDTAAKVAAVTDIYTQLGLDKIAQTLADAYFAKGFEAL
ENLPIAPERKRPIMEFAAFLVGRES
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgacttttcaaccttatctggaagcgatttcaacccaaattcaacatactgcttacggc
gaggagcctaccgaattatatgagcctatccgttatatcatgtcgttggggggcaagcgt
ttacgccctctgctgactgttttgtcggccaatcttttcatagatgactggcaaaaagcg
cttaagccggccattgcggtggaggtttttcacaattttaccctgatgcacgacgacatc
atggactgtgcgccgctgcgacgcggcaaacccaccgtgcatgagaaatggaacgccaat
acggcgattttatcgggtgatgtgatgctcgtcaatgcctatgaattattgctggatgta
gcaccggcacagttgccgcgtgtcattaagcgtttcaatcgtacggcggcagaagtctgc
gaaggccagcagctggatatgaactttgaaacccgcacggatgtgtcgcaggaagaatac
atcggcatgattcgcctcaaaacgtcggttttgctggggtttgcgatggagttgggtggt
atcattgcgggagcagatgaagccaccacgcaattgctttacgatgccggcgtgaacatg
gggctgggctttcagttaaaagatgacctgttggatgtatacggcgatcctgagaagttt
ggaaagcaggtagggggggatatcatagccaacaaaaaaacctttatgcttatagaagcg
cttctgctggccgaaggcaaaaccaaagaagcactcaattactggcttagtttggagcag
ggctcgtacgataccgccgctaaagtagccgccgtgactgatatttatacccaactcggc
ctcgacaaaattgcccaaaccctggccgatgcgtattttgcaaagggatttgaagcgctg
gagaatctccccattgcgccggagcgcaaacgaccgatcatggaatttgccgcgtttttg
gtggggcgggagagttaa
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