Runella slithyformis: Runsl_3008
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Entry
Runsl_3008 CDS
T01553
Name
(GenBank) NusA antitermination factor
KO
K02600
transcription termination/antitermination protein NusA
Organism
rsi
Runella slithyformis
Brite
KEGG Orthology (KO) [BR:
rsi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsi03021
]
Runsl_3008
03009 Ribosome biogenesis [BR:
rsi03009
]
Runsl_3008
Transcription machinery [BR:
rsi03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Runsl_3008
Ribosome biogenesis [BR:
rsi03009
]
Prokaryotic type
rRNA transcription factors
Runsl_3008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
KH_2
KH_NusA_C
KH_1
KH_KhpA-B
S1
Motif
Other DBs
NCBI-ProteinID:
AEI49393
UniProt:
A0A7U4E6M1
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All DBs
Position
3505175..3506419
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AA seq
414 aa
AA seq
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MDSVVLIESFAEFARSKNIDRPTIIKVLEEVFRTMIRKKYGTDTNFDVIINPDTGDLEMW
RTREIVDDNSEDIWEPDKIPLAEARKIQDDFEVGEEVAEEVKLEDFGRRMVQTARQTLIQ
KVKDLEKELLYFKYKDMVGDLLNVEVYQILKNELICLDSEGNELVLPKQEQIFKDKYRKG
EPVKVVIHKVELNNGTPRITLSRTSPVFLERLFEAEIPEIYDGLINIRKIVREPGERAKV
AVESYDDRIDPVGACVGMKGSRIHTIVRELNNENIDVINYTENLELLIQRALSPAKITSM
VIDRDTKRVSVYLKPDQVSLAIGKGGQNIKLAGRLVSMEIDVFRDVEGQEDEEDVDLSEF
TDEIDEWMIEEFRKIGLDTAKQVINISREELVRRTDLEEETVEEILEILRREFE
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggatagcgtagtattgatagaatcgttcgccgagtttgctcgctccaaaaatattgat
cgtcctacgattattaaagtattggaggaagtgtttcgcacgatgattcgtaaaaaatac
ggtactgataccaactttgatgtgattatcaacccggataccggcgacctcgaaatgtgg
cgtacccgtgaaattgtggatgataactcagaagatatttgggaaccggataaaatacct
ctggccgaagcacgcaaaattcaggatgactttgaagtgggcgaagaagtggctgaggag
gtaaaactggaagatttcgggcggcgaatggtccaaacggcacgtcagacgctgattcag
aaagtaaaggatttggagaaggagttgctgtatttcaaatacaaagacatggtcggtgac
ctactcaatgtagaagtataccaaatactcaaaaacgaactcatttgtttagacagtgaa
ggaaacgaactggtattgcccaaacaggagcagatctttaaggataaataccgtaaaggc
gagcctgtaaaggtggtgattcacaaggtagagctcaacaacggtaccccacgaattacg
ctttcccgtacgtctcctgtattcctggagcgattgtttgaagccgaaattcctgaaatt
tacgatggcctcattaatatccgtaaaattgtgcgcgagcccggcgagcgtgccaaagta
gcggtcgagtcgtatgatgaccgtattgatcctgtaggggcatgtgtagggatgaaagga
tcacggattcataccattgtgagagaactgaataatgagaacattgacgttatcaattat
accgaaaatctcgaattgctcattcagcgcgccctcagccctgccaaaatcacatcgatg
gtcatagaccgagataccaaacgggtgtcggtttatctgaaaccggaccaagtgtcgttg
gccattggaaaaggcggacagaacattaaactcgccggacgtttggtcagcatggaaatt
gatgtgttccgtgatgtagaaggtcaggaagatgaggaagatgttgacttaagcgaattt
acggatgagatcgatgagtggatgattgaagaatttcgcaaaattggtttggataccgca
aaacaggtcatcaatatcagtagagaagagcttgtacgccgtaccgacctagaagaagaa
acagtagaagaaatcctggaaattttacgtcgtgaatttgaatga
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