Runella slithyformis: Runsl_3055
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Entry
Runsl_3055 CDS
T01553
Name
(GenBank) cell wall hydrolase/autolysin
KO
K01448
N-acetylmuramoyl-L-alanine amidase [EC:
3.5.1.28
]
Organism
rsi
Runella slithyformis
Pathway
rsi01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
rsi00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
Runsl_3055
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rsi01011
]
Runsl_3055
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rsi03036
]
Runsl_3055
Enzymes [BR:
rsi01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.28 N-acetylmuramoyl-L-alanine amidase
Runsl_3055
Peptidoglycan biosynthesis and degradation proteins [BR:
rsi01011
]
Peptidoglycan biosynthesis and degradation
Amidase
Runsl_3055
Chromosome and associated proteins [BR:
rsi03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Runsl_3055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amidase_3
DUF6301
Hydrolase_4
Motif
Other DBs
NCBI-ProteinID:
AEI49439
UniProt:
A0A7U4E6R6
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All DBs
Position
3555584..3556369
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AA seq
261 aa
AA seq
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MSMILKPLLVFSWIVLCSFTFKSDAEGGIKTIVIDAGHGGKDPGARGRISREKDIVLDIT
LQLARKIKTEMPEVKVVLTRATDKFVDLNERSNIANRRKADLFISIHCNSLPKNKVSPAG
TETFVMGLHKSDENLEVAKRENAVILLEKDYEDKYNGFNPNSPLAYIMLANRQSAYIASS
LNFAGKIERQFKKHADRSSRGVKQAGFMVLWQTAMPSVLVEAGFLSHAQEEKYLNSEEGQ
DQIAESIFRAFKQYKEEVEEN
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgatacttaaacccctacttgtctttagctggattgtactctgcagctttacc
ttcaaatctgacgccgaaggagggatcaagaccatagtaattgatgcaggccacggcgga
aaagaccccggcgcacgcgggcgaatctcacgtgagaaggatattgtattggatattacg
ctccaattggcgcgcaagatcaagactgaaatgccggaagtaaaggtggtattgacgcgt
gctacggataaatttgtggacctgaacgaacggtcaaatatcgccaaccgccgcaaagcg
gatctgtttatctccattcactgtaattctcttcccaaaaataaagtaagcccggcggga
actgagaccttcgtgatgggattgcacaaatcagacgagaacctcgaagtggccaagcga
gaaaacgccgttattttattggaaaaagactacgaagacaaatacaacggctttaatccc
aactctccgcttgcctacataatgctggccaatcggcagagtgcgtatattgcgagcagt
ttaaattttgccggaaagattgagcgccagtttaaaaaacacgccgaccggagcagtcgc
ggggtaaaacaggcgggatttatggtgttatggcaaacggcaatgccgagtgtgttggtg
gaagctggctttttgagccatgctcaggaagaaaaataccttaattcggaagaaggacag
gatcaaatcgcggaatctatctttcgcgcttttaagcaatataaagaagaagtggaagaa
aactga
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