Runella slithyformis: Runsl_3080
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Entry
Runsl_3080 CDS
T01553
Name
(GenBank) TonB-dependent receptor plug
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
rsi
Runella slithyformis
Brite
KEGG Orthology (KO) [BR:
rsi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rsi02000
]
Runsl_3080
Transporters [BR:
rsi02000
]
Other transporters
Pores ion channels [TC:
1
]
Runsl_3080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plug
CarbopepD_reg_2
TonB_dep_Rec_b-barrel
CarboxypepD_reg
Motif
Other DBs
NCBI-ProteinID:
AEI49464
UniProt:
A0A7U4E6L9
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All DBs
Position
3591818..3594913
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AA seq
1031 aa
AA seq
DB search
MKHILRISVWMLVCLSFVAVRAQDKTVTGKVSSSEDGAGMPGVSISVKGTTRGANSDGEG
NYRISVPDNATLVFSFVGFAPVEEKVNGRSAINIQMVPDAKNLSEIVVTGFGSQIKRELT
GNIAQVKGKDIENMPTPTVDAALQGKAAGVFINSGSGKLGQAVTVRVRGNSSISASSQPL
YVVDGTPITTGDFGNYGGETNALADINPNDIESIEVLKDASAGAIYGARAANGVVLITTK
RGKAGKTNISFNFQTGSAEAARRLPFLNSEQFISFYRQAAGYRDRIANIDPNDPDSFTQS
IFGAGGFLEYYSYGTYGTPQQADVNWQEQAFQKAPMHQADLQLSGGNDKTRFFISGQYLD
QTGTIIGNRLKRMSGRLNLDHQANNWLSLGLTMNLARTENQRLPDDNAFSNPLQMAALTP
LTPFLDPNTGLPAGTPPGDISIPLYYNPIISINYARFVATSIRNLTNGYLQANIFKGLKF
RSEIGIDLLNQQEEGYFQSQTVRNQTRASNGIGSNYGTFVTNYNTNNFFAYDNSFGRHGI
SATLGMSYQQSQTKTNFIEGTQFPSNSYQRIASAATKSDGSSTETNFRFLSYFARANYKF
ADKYLLSASARIDGSSRFGANSRYSFFPAVSVGWVLSEENFLKNNAVISFLKARASYGGT
GNSEIGNFPQLGLFQGDAGYAGAAGQRPSQIGNPDLRWETTYQTDFGIDYGILNNRINGE
IDYYVKNTTGLLLNVNIPATTGFASQVRNVGKLENKGFEFVINTQNFVGKFKWNTSFNWA
NNRNKVTDIQGQIIEGGIRNMNRVVEGQPIGVFYTVEYAGVNPDNGDALFYKNTKGADGS
LDRTTVTNSGYNSAQRVVVGNPNPKFIGGITNSFSYKGFDLSVFFNGVYGNNVNFYGVGQ
YSSANGIYEDNQTTDQLNAWTPTNRNTDVPEARYLRGNGNQASSRYIFDGSYLRLRTATL
SYTLPTSLVNRVKLERVKFYVSGMNLATFTNYKGWDPEVSADSFTSNFAIGNDFYTPPQP
RTILVGINIGL
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgaaacacattttacgcattagtgtatggatgttagtgtgcctgtcgttcgtggccgta
agagcgcaggacaagaccgtgaccggaaaggtcagttcatccgaagacggtgccggtatg
ccgggcgtctcgatttcagtaaaagggaccacgcgcggtgccaattccgacggtgaagga
aactaccgtatctctgtgcctgacaacgcaaccctcgttttcagctttgtcggatttgct
ccggtcgaagaaaaggtaaacggccgctctgcgatcaatattcagatggtgccggacgcc
aaaaacttgagtgagatcgtagtgacaggatttggttcgcagatcaagcgcgaattgacc
ggaaacatcgcccaggtaaaaggaaaggatattgaaaatatgcctacgccgaccgtagat
gcggctcttcagggaaaagctgccggcgtattcatcaactcaggttcaggtaaactgggc
caggccgtaaccgtacgtgttcgcggaaactcttctatcagtgccagcagtcagccgctg
tatgtagtcgacggaacgcccatcacaacgggtgacttcggaaactacggtggggaaacc
aacgccttggctgacatcaaccccaatgatattgagtctattgaagtattgaaagatgct
tctgcgggggctatttatggtgcccgcgcggccaacggggtggtgctgattaccaccaaa
cgcggtaaagcaggaaaaaccaatatctccttcaatttccagaccggttcggccgaagct
gcccgccgcctgcctttccttaattcggagcaatttatctctttctacaggcaggccgca
ggataccgtgacagaattgcaaacattgaccccaatgatcccgattcttttacccagtca
atctttggagcaggcggttttttggaatattacagttacggaacctacggaactccccaa
caggcagatgtcaattggcaggagcaggcgtttcaaaaagcgccgatgcatcaggctgac
ctgcagttgagcggtggaaatgataaaacacgattctttatttcaggtcaatatttagat
cagacaggaacaatcatcggcaaccggttgaagcgcatgtccggtcgtctgaaccttgat
caccaagccaataattggctttccttgggcttgaccatgaatttggcccgtaccgaaaat
caacgtttaccggatgataacgcattctccaacccgttgcagatggcagccttgacgccc
cttacgccgtttttggaccccaatacggggcttcctgccggtacgcctccgggagatatc
agtattcccctgtactataacccgatcatttcaatcaactacgccagattcgtggcaacg
tccattcgtaacctaacgaacggttatttgcaggccaacatttttaaaggattgaaattt
cgcagtgaaatcggcattgacctattgaaccaacaggaagaagggtattttcagagccaa
accgtacgtaaccaaacccgcgccagcaatggtataggctcaaactacggcacgtttgta
actaactataataccaataacttctttgcgtacgataacagcttcggcagacacggtatc
agtgccacgctcgggatgtcgtatcaacaatcgcaaaccaagaccaacttcattgaaggt
acacagttcccgtctaactcctatcagcggatcgcgagtgccgcgaccaagtctgacggc
agcagcaccgaaactaacttccgcttcctgtcgtattttgcccgggccaattataaattt
gccgataaatacttgctttcggccagtgcgcgtatcgacgggtcttcccgttttggggcc
aactcacggtacagcttctttccggcggtttcggtgggatgggtattgtcggaagagaat
ttcctgaaaaataacgccgtcatcagttttctgaaagcccgcgccagctacggcggaacc
ggaaactctgagatcggaaacttcccgcaattaggcctgtttcagggtgatgcgggttat
gcaggagcagccggtcagcgtccttcccaaatcggaaatcctgatttgagatgggaaaca
acctaccagaccgacttcggtattgactacgggattcttaacaaccgcatcaacggggaa
atagattactacgttaaaaatactacaggcttgttgttgaacgtaaatatcccggcgact
accgggtttgccagccaagtgcgtaacgtaggaaaactggaaaataaaggatttgagttt
gtgatcaacacccaaaactttgtgggtaagtttaaatggaatacctcctttaactgggct
aacaaccgaaataaagtgactgacattcagggccagatcattgaaggcggaattcgtaat
atgaaccgcgttgttgaaggccaacccatcggagtgttttatacggttgaatacgcgggc
gtaaatcccgataacggtgatgcgttgttttacaaaaatacgaaaggagctgacggttct
cttgacagaacaacggtaaccaactcaggctacaactctgcacagcgcgtagtggttgga
aatcctaacccgaaatttatcggcggtattaccaactcattctcttacaagggctttgac
ctaagcgtatttttcaatggagtgtacggtaataatgtaaacttctacggggtaggtcag
tattcatcggccaacggtatttatgaagataatcaaaccaccgaccaattgaatgcctgg
actcctaccaaccgtaataccgatgtacccgaagcacgctatttgcgcggcaacggaaat
caggcttccagtcgctatattttcgatggttcttacctgcgtctgcgtaccgccactttg
agctacacgttgccaacgagccttgtcaatcgcgtaaaactggaaagagttaagttctat
gtttcaggaatgaacttagccacttttaccaattataaaggttgggatccggaagtgagc
gccgacagctttaccagcaattttgccattggtaatgacttctatacgccgccacaaccg
cgtacaattttggtgggtatcaatattggtttgtaa
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