KEGG   Runella slithyformis: Runsl_3162
Entry
Runsl_3162        CDS       T01553                                 
Name
(GenBank) riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
rsi  Runella slithyformis
Pathway
rsi00740  Riboflavin metabolism
rsi01100  Metabolic pathways
rsi01110  Biosynthesis of secondary metabolites
rsi01240  Biosynthesis of cofactors
rsi02024  Quorum sensing
Module
rsi_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:rsi00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    Runsl_3162
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Runsl_3162
Enzymes [BR:rsi01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     Runsl_3162
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     Runsl_3162
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD Bd3614-deam YwqJ-deaminase Arb2 PhnG
Other DBs
NCBI-ProteinID: AEI49543
UniProt: A0A7U4E6R8
LinkDB
Position
complement(3695085..3696143)
AA seq 352 aa
MNDSLQPMDSLYMRRALELATLGRGRVSPNPMVGCVIVSNDRIIGEGWHQRYGERHAEVN
AVNDALAQNSAPLLPEATVYVTLEPCSHFGKTPPCADLLIEKRVKRVVICNDDPNPLVAG
KGIEKLRETGIEVITGVLSEEGRTLNARFFTFFEQKRPYIILKWAQTADGFIADEDKQPL
MISCRQSRTLSHQWRTQEDAILVGTNTALNDNPQLNARLWTGPNPIRIVLDRTLRLPHEL
HVFDNTQKTLLYNAFSNEEEGETTFVQINFDENFIDRFLSDLHKRKIQSVLVEGGAQLLQ
AFLNDGHFDEIRVFTSPTPIRKGTSAPLLPTGVRLITQKQIGTDWLAYYEKE
NT seq 1059 nt   +upstreamnt  +downstreamnt
atgaacgactccttacaacccatggatagcctatacatgcgccgtgcattggaacttgcc
accctcggacgcggcagggttagccctaatccgatggtaggctgcgtgattgtcagcaat
gaccgaatcatcggagaaggttggcatcaacgctatggcgaaagacacgccgaggtcaat
gccgtcaatgacgcactggcacaaaactccgctcctctcctacccgaagccacggtatac
gtgacgcttgaaccttgctctcactttggcaaaaccccgccctgcgccgatctgttgatc
gaaaaacgggtaaaacgcgtcgttatctgcaacgatgacccgaatccactggtggcgggg
aaaggaattgagaagttacgggagacgggtatagaggtcattacgggagtgttgtctgag
gaaggccgcacattgaatgcccgtttttttactttttttgagcaaaaacgtccgtatatc
attctgaaatgggcccaaactgccgacggctttattgccgacgaagacaaacaaccgctc
atgatcagttgccgacagtcgcgaacgttgagtcaccaatggcgcacgcaggaagatgcg
attttggtcggtaccaacacggccctcaatgataatccccaactcaacgcccgtctgtgg
acggggccgaatccaatccgtattgttcttgaccgcactttacgcctgccgcacgagctt
catgtgtttgacaatactcaaaaaacgctactctataatgccttcagcaacgaagaagaa
ggagaaactacgtttgtacagattaattttgacgagaattttatcgaccgttttttatcc
gacctgcataaacggaagatacagtccgtgctggtagaaggcggtgcccaactccttcag
gcatttttgaacgacgggcattttgatgagatcagggtgtttacaagtcccactcctatc
cgtaaaggcacttcggctccgctgttgcccacgggagttcggttgattacccaaaaacaa
ataggtaccgactggctggcttattacgagaaagagtga

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