Runella slithyformis: Runsl_3286
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Entry
Runsl_3286 CDS
T01553
Name
(GenBank) histone family protein DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
rsi
Runella slithyformis
Brite
KEGG Orthology (KO) [BR:
rsi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rsi03032
]
Runsl_3286
03036 Chromosome and associated proteins [BR:
rsi03036
]
Runsl_3286
03400 DNA repair and recombination proteins [BR:
rsi03400
]
Runsl_3286
DNA replication proteins [BR:
rsi03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Runsl_3286
Chromosome and associated proteins [BR:
rsi03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Runsl_3286
DNA repair and recombination proteins [BR:
rsi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Runsl_3286
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
AEI49661
UniProt:
A0A7U4E6J4
LinkDB
All DBs
Position
complement(3841918..3842193)
Genome browser
AA seq
91 aa
AA seq
DB search
MTKAELVFAISRKTGLEKPDVEVTVEALFDVIKKSLANGKIIYLRGFGNFQNKKRARRTA
RNIKHNTTVIVEAHEYPSFKPSKLFIEELKG
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaagcagaattagttttcgccatttcccggaaaaccggccttgaaaaacccgat
gttgaagtcaccgttgaggcattatttgatgtcatcaaaaaatcgcttgctaacggcaaa
atcatttacttaaggggcttcggcaactttcaaaacaaaaaacgcgcccgacgaacggcg
cgtaacattaagcacaataccacggtcatagtggaagcgcacgaatacccgtcgtttaag
ccctcaaagctgttcattgaagaattaaagggataa
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integrated database retrieval system
