Runella slithyformis: Runsl_3413
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Entry
Runsl_3413 CDS
T01553
Name
(GenBank) Carbohydrate binding family 6
KO
K01179
endoglucanase [EC:
3.2.1.4
]
Organism
rsi
Runella slithyformis
Pathway
rsi00500
Starch and sucrose metabolism
rsi01100
Metabolic pathways
rsi02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rsi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
Runsl_3413
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Runsl_3413
Enzymes [BR:
rsi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.4 cellulase
Runsl_3413
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CBM_6
CBM_35_2
CBM_35
Por_Secre_tail
Glyco_hydro_42
Motif
Other DBs
NCBI-ProteinID:
AEI49779
UniProt:
A0A7U4E6X8
LinkDB
All DBs
Position
complement(3979354..3983154)
Genome browser
AA seq
1266 aa
AA seq
DB search
MKNTVTTLLCLFLAVAAFSQKAIPGKIEAESYDAMSGIATENTQDSGGGLNVGWIDDNDW
LDYKVSIPSNGMYAFNLRVAKGFGNGTVEVRKADGTVLGSVVLPLTGGWQSWGNAKLIIP
LTAGTQTLRIYAKYGSWNFNWFEVAKYNTFPGKTEAENYDAMSGIATENTQDIGGGLNVG
WIDDNDWLDYDVNVATTGTYSLRFRTAKGYGDGTIEIKTANGTVIGTAVLPITGGWQSWS
TSTALVQLNAGPQRLRIYAKYGAWNFNWLEAVEGRPIGKIEAESYDVMSGIQLENANDIG
GGQNVSWIDDNDWIDYNVKIPTSGSYKFKFRVTNPYGTAQIQLRNAAGNVLATITPPQTW
DWQDWKTVETIVSLPAGSQKLRIYAVKGNWNFNWFDVSKPDTSSTPLPQSVINFAELPQK
MVGDAPFNLNATGNNTQTPITFTSSNPSIVSVSNATGLWKATIHAIGSAVITASQEGNTN
YLAAAPVSRTQAVTAYYAGTKIPIQANRWYQLNNVSKGLEGLFDGITDVAVHTGYSKVLE
NYDAYYPLLPGEQMKIDRIKFFDGEGSFADKPMTLSVITNDWQRIPLASFTGQRYNSWVG
PYADRPNTFDLDLTITNARYLVINAWWGYPNEMELYGTYTPPTAPSNGPYRQKSIPLKDM
LGVNAFEWDFQEAWDNSISETKLRAMKTFGGIRHYADWDKLEPNEGKYTFNPTHSGSWDY
DGLYARLKAEGMNVVGCLKTIPPWLEATYPEGERDSENVPVRYGKNFSVPASYIEQAKLA
FQYAARYGNNPNVNPALLSVDPSQRWNGDGINVVKIGLNLIKYMECDNERDKWWKGRKAY
QTGREYAANLSAFYDGHKNTMGPGVGVKNADPSMKVVMAGLASPFIGIDYIRGMIDWCKE
FRGYKPDGSVNLCWDVINYHFYPDNSSSTQDGTGTRGVAPEVSKAAEVAQNFIRIAQQYA
QDMPVWMSETGYDVNQGSPLKAIAIGNRSILQTQADWTLRNALLYARKGVERVYFYQTYD
YDINNPSQFGSSGLLNGDRTRKPAADFLYQTNRRFGKYIYKETLQNDPIIDRYELNGKSA
YVLVIPDEKGRTGTATLNLGGATSAKIYKPTIGSDSMQVEAVNTVQGLLTLTVTETPVFV
VASDQVTTATADSSSVAVARVGVQTNAMFAPNPLETEHAKLHDIITVYPNPSTDYVMISF
ESNNPEPLEVKIFNANLGILHREASFSKTTAAFSEKIDVSKLLPGAYIIEVSQGNERAFR
KIVKAP
NT seq
3801 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatacggttacaacactgttatgcctttttttagcagtagctgctttttcacaa
aaggccattccgggtaaaattgaggccgaaagctatgatgccatgagtggcattgccacc
gaaaacacccaagatagtgggggtgggctcaacgtaggctggatcgacgacaatgattgg
cttgattataaggtcagtattccctccaacgggatgtatgcctttaatttaagggtagcc
aagggatttggcaacggtaccgttgaagtacgaaaagccgacggcacagtgctcggctcg
gtggtcctgcctttgacgggtggctggcaaagctggggtaatgccaaattgatcattccg
ctaacggccggcacacaaaccctgcgtatatatgctaagtacggctcatggaactttaac
tggtttgaggtagcaaaatacaacacttttccgggaaaaacagaggctgaaaactatgat
gccatgagtggcattgccaccgaaaatacccaagatattgggggtgggctcaacgtaggc
tggatcgacgacaatgattggcttgactacgatgtaaacgtagccactacaggcacttac
tcgcttcgtttcagaaccgccaaaggctatggcgacggcaccatcgaaataaaaacggca
aacggaaccgtgatcggcactgcggtcttacctattacgggcggctggcaaagctggagc
acgagcacagcccttgttcaactgaacgccggcccgcagcggctcagaatctatgccaag
tatggcgcctggaacttcaactggcttgaagccgttgaagggcgtccgatcggtaaaatt
gaagctgaaagctacgatgtcatgagcggtattcaattagaaaatgccaatgatatcggc
ggagggcagaatgtgagttggatcgacgacaacgattggattgattacaatgtaaaaata
ccgacgtcgggttcctataagttcaaattccgggtcaccaatccctatggaactgcccaa
attcagcttagaaacgcagcaggaaatgtcttggcaaccatcacccctccccaaacctgg
gattggcaggattggaagaccgtagagaccattgtatctcttccggccgggagtcagaaa
ttgcggatctatgctgtcaaaggcaactggaatttcaactggtttgacgtaagcaaaccc
gacacttcttctacccctcttccccaatcagtgatcaattttgcggaacttccccaaaaa
atggtgggcgatgctccgtttaacttaaacgctaccggcaataacactcaaacacctatt
acttttacctcgtccaacccttcaatcgtttctgtttccaacgctacaggtttgtggaaa
gcgacgatacacgctataggctcagcggtgattaccgcctcacaggaaggtaatacaaac
tatctggcggctgcacccgtttccagaactcaggcagtcacggcctattatgcaggcacg
aaaatacccattcaggccaatcgctggtaccagcttaacaatgtctcgaaaggattggaa
gggctctttgacggcattaccgacgttgcggttcataccggctacagtaaggttctggaa
aactacgatgcctattatccgttgttgcccggcgaacaaatgaagatcgaccgcattaaa
tttttcgatggcgaaggctcatttgccgataagcctatgacgctctccgtcattaccaat
gactggcagcggattcccctggcaagcttcaccggacagcgctacaacagctgggtaggc
ccttacgctgatcggcccaatacgttcgatttggatctgaccatcaccaacgcccgctat
ttggtcatcaatgcgtggtgggggtatcccaatgaaatggaattgtacggtacctatacg
ccgccaacagctccttccaacggcccctatcgtcagaaatccattccgttaaaagatatg
ctcggcgtcaatgcgttcgagtgggatttccaggaagcatgggataactccatcagcgaa
accaaactccgcgccatgaaaacattcggcggaatacggcattacgccgactgggataaa
ttagagcctaatgaagggaagtacaccttcaatcctactcacagcggcagctgggactat
gacggcctgtatgctcgcctcaaagcggaaggaatgaacgtagtaggctgcctgaaaacc
attccaccgtggctggaagctacttatcctgaaggcgaaagggactcggaaaatgtgccg
gtccgctacggaaaaaacttctctgtccctgcttcgtacattgaacaagccaaattggcg
tttcaatacgccgcccgttatggcaataatcccaacgtaaaccctgccctgttgagcgta
gacccaagtcagcggtggaacggcgacggtatcaatgtggtaaagatcggactgaatctg
atcaaatacatggaatgcgacaacgagcgcgacaaatggtggaaaggccgtaaagcctat
caaacgggccgcgaatacgccgccaatctatccgctttttacgacggacataaaaataca
atgggtcccggggtgggcgtaaaaaatgcggacccttccatgaaggttgtgatggccggg
cttgcctcgcctttcattggcatcgactacatcagaggcatgatcgactggtgcaaagaa
ttcagaggatataaacccgacggaagcgttaatttgtgctgggacgtcatcaactaccat
ttttaccccgacaattcttcgtctactcaagacggtaccggcacgcgcggagtggcaccc
gaagtgtcaaaagccgcggaagtggcccaaaacttcattcggattgcgcaacagtacgcc
caggatatgcccgtatggatgagcgaaaccggctacgatgtcaatcagggcagtccgctg
aaagccattgccatcggcaatcgctcgattctgcagacgcaagccgactggacactgaga
aatgcgcttttgtacgcccgtaaaggtgttgagcgggtatatttttaccaaacctacgat
tacgacatcaacaatccatctcaattcggctcttcgggtttgctcaacggcgaccgaacc
cgcaagccggctgccgactttttgtaccaaaccaatcgtcgattcgggaaatacatttat
aaagaaacccttcaaaacgaccccatcatcgaccgctatgagctcaatggcaaatctgcc
tatgtcttggtcattcccgatgaaaaaggccgtaccggcaccgcaacgctgaatttggga
ggtgccacttccgccaaaatttacaaaccgaccatcggaagcgattccatgcaggtagaa
gcggtgaatacagtgcaggggctattgactctcaccgtgaccgaaacccccgtatttgtt
gttgcctctgatcaggtaacaaccgctactgccgactcttcttctgtcgcagtggcgcgg
gtaggtgtccaaaccaacgcaatgtttgcacccaatccgttggagaccgagcacgcgaaa
ttacacgatatcataaccgtctaccctaatccatcgacagactacgtaatgatctctttt
gaaagcaacaatcccgagccattagaggtaaaaatattcaacgctaatttgggcattctt
catcgcgaagcgtcattctccaaaacgaccgctgcgttttccgaaaagatcgatgtgtca
aagttgttaccgggcgcatacatcatagaggtcagccaaggcaatgagcgcgctttccgt
aaaatcgttaaagcaccctga
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