Runella slithyformis: Runsl_3484
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Entry
Runsl_3484 CDS
T01553
Name
(GenBank) Xenobiotic-transporting ATPase
KO
K18890
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
rsi
Runella slithyformis
Pathway
rsi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rsi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Runsl_3484
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rsi02000
]
Runsl_3484
Transporters [BR:
rsi02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Runsl_3484
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
Zeta_toxin
ACR_tran
MMR_HSR1
Pox_P21
Dynamin_N
AAA_22
AAA_29
AAA_15
SbcC_Walker_B
Motif
Other DBs
NCBI-ProteinID:
AEI49848
UniProt:
A0A7U4E6Q5
LinkDB
All DBs
Position
complement(4059716..4061479)
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AA seq
587 aa
AA seq
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MNEEQKSGKIVDWPTLRRLYTFIKPYQKQFYLLVAIILLSAFLSPLSPLLIRYTIDNQIA
NGDYNGLAVMLLIMIGILLVQALIQFANTYLAGWLGQNIIRDIRVQVYEKIMGLRLKFFD
NTPIGRLVTRTVSDVETLSDVFSDGMAAVAGDILQLVLIIGVMFYTDWRLSLISLATVPF
MLVSTYIFKEKIKDSFNEVRTAVSNLNSFVQEHITGMNIVQIFSAEKTEYRKFERINTVH
RDANIRSIWYYSVYYPVADVIAAAATGLVVWYGAREIMHYNVTFGTVTAFIIFIGLFFRP
IRMLADRFNTLQMGIVSTDRILKLLDSHEFTVNNGTFAPETLRGEVSFKNVWFAYNDEEY
VLKDISFDVKEGETIAFVGATGAGKSSVINLLSRFYDINKGDILIDGTEIHEYELGALRR
NIGVVLQDVFLFSDTIHNNITLGNTSISRARIIEAAQLVGAHEFIERLPGGYDYNVMERG
ATLSVGQRQLISFVRALVHDPKIIVLDEATSSVDTETEELIQNAIEKLMKGRTAIVIAHR
LSTIQKANKIIVLDKGEIQEKGMHDELLERGGFYANLYRMQYKEVMG
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaagaacaaaaaagcggaaaaatagttgactggcctacccttcgccgtctttat
accttcattaagccttaccaaaaacaattttatttactggttgccatcattttattgagc
gcttttctgtcgccgttgagcccactgttgattcgttataccattgataatcaaatcgcc
aacggtgattataacggccttgcggtcatgctgttgatcatgatcggtattttgctggta
caagcgctgattcaatttgccaatacctatctggcgggttggctgggacaaaatatcatt
cgtgacattcgcgtacaggtatatgaaaagatcatgggcctacgcctgaaattcttcgac
aatacccccatcggccgattggtgacgcgtaccgtctctgacgtggaaaccctttccgat
gtattcagcgacggcatggcggccgtggcgggagatattttgcagttggttttgattatc
ggagtgatgttttacactgattggcgtctttcgctcatcagtctggctaccgtgcccttt
atgctggtcagtacgtatattttcaaagaaaagatcaaggattcgttcaacgaagtacgt
acggcggtatccaacctcaattcgtttgttcaggagcacattacaggcatgaacatcgtg
cagatcttcagtgccgaaaaaaccgaataccgtaaatttgaacggatcaacaccgttcac
cgcgatgccaacattcgttctatatggtactactccgtctattatcccgtggccgatgtg
attgcggcagcagctaccggattggtggtttggtacggtgcccgtgagatcatgcattat
aatgtcacttttggtaccgttacggcctttatcatttttatcggcctctttttccgcccg
atacgcatgttggccgaccgtttcaatacccttcagatgggaatcgtgagtactgaccgt
attctgaaactgttggacagccacgagttcacggtcaacaacggtacttttgccccggaa
accctgcgcggtgaggtttcttttaaaaacgtttggtttgcctacaacgacgaagaatac
gtattgaaagatatttcatttgacgtaaaagagggagaaaccattgcgtttgtgggggct
acgggcgcgggtaaatcgtcggtcattaacctgttgagccgtttttatgacatcaataaa
ggcgatatcctgatcgacggcaccgaaattcatgaatatgaactgggcgctttgcggcgc
aatatcggagtagtattgcaggacgtgttcttattctcggacaccatccataacaatatc
acactgggcaatacctccatcagccgcgcccggatcatcgaagccgcgcagttggtgggc
gcgcacgaatttatcgagcgcctgcccggaggctatgattataacgttatggagcgcggc
gctacgctttcggtaggacaacgccaattgatctcgttcgttcgggcactggttcacgac
cccaaaatcatcgtgttggacgaggctacgtcgtcggtcgataccgaaacggaagaattg
attcagaatgccattgaaaaactgatgaaaggccgcaccgctatcgtgattgcgcaccgg
ttgagtaccatccagaaagccaataagatcatcgtgctcgataaaggagaaattcaggaa
aaaggtatgcacgacgagttgctggagcgcggcggattttacgccaatctgtatcgaatg
cagtataaagaggtgatggggtaa
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