Runella slithyformis: Runsl_3616
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Entry
Runsl_3616 CDS
T01553
Name
(GenBank) peptidylprolyl isomerase (FKBP-type peptidyl-prolyl cis-trans isomerase)
KO
K03775
FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:
5.2.1.8
]
Organism
rsi
Runella slithyformis
Brite
KEGG Orthology (KO) [BR:
rsi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
rsi03110
]
Runsl_3616
Enzymes [BR:
rsi01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
Runsl_3616
Chaperones and folding catalysts [BR:
rsi03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
FKBP
Runsl_3616
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FKBP_C
FKBP26_IF
Motif
Other DBs
NCBI-ProteinID:
AEI49975
UniProt:
A0A7U3ZMJ1
LinkDB
All DBs
Position
4198715..4199227
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AA seq
170 aa
AA seq
DB search
MKIAPNQVVAVTYELSLLNDGDEWQMVETVGDDQPMYFIQGMSGLPEAFEDKLNGLEEGD
SFDFKLDPEQGYGDYDTEAVAEIPLDVFKVDGKLQDDILQVGNMVPMTNEEGHRLMGQIV
EIDAEFVLMDFNHPLAGREMHFVGKVHKVRAATAEELEHGHVHGDGGVHH
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatagcacctaatcaagtcgtagctgtgacctacgaactgagtcttttaaacgac
ggcgacgaatggcaaatggtcgaaaccgttggtgatgaccaacctatgtattttattcaa
ggcatgagcggcctgcctgaagcgtttgaagacaaactgaacggccttgaggaaggtgat
tccttcgactttaaattggatcctgaacaaggctacggagattatgataccgaagcggtg
gcagagattcctttggacgtatttaaagtagacggtaagctccaggatgacattcttcag
gtgggaaatatggttccgatgaccaacgaagaaggacatcgtttgatgggtcaaatcgtt
gaaattgacgctgaatttgtcctgatggattttaaccatccgttggccggccgtgaaatg
cattttgtaggaaaagtacacaaagtacgtgccgctaccgcagaagaactggaacacggc
cacgtccacggcgacggcggagtgcatcattaa
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