Runella slithyformis: Runsl_3641
Help
Entry
Runsl_3641 CDS
T01553
Name
(GenBank) ABC-type transporter, integral membrane subunit
KO
K10439
ribose transport system substrate-binding protein
K10440
ribose transport system permease protein
Organism
rsi
Runella slithyformis
Pathway
rsi02010
ABC transporters
rsi02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
rsi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Runsl_3641
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
Runsl_3641
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rsi02000
]
Runsl_3641
Transporters [BR:
rsi02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
Runsl_3641
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
BPD_transp_2
Peripla_BP_1
Motif
Other DBs
NCBI-ProteinID:
AEI49999
UniProt:
A0A7U3ZMM7
LinkDB
All DBs
Position
4233370..4235358
Genome browser
AA seq
662 aa
AA seq
DB search
MKYLQDRIFTLSVLIVLVCIGASMAFPQQFPTFENFSQILLNVSIETIVAVGMMVLMITG
VFDLSVGSVVALSGGLAAYLMVNMGISMPVAVLAGVLASLAVGWVNGYFIAKVGINPLIQ
TLATMGMVRGLALMIAGAGIQNLPYEFIYIGQSKLLKIQSPVWWMLAVVLIFHLLTTRTV
FFRRYYYIGGNEKAADLSGIRVRKMKHYAFILSALLAGIAGILIASRLGSAIASIGKGME
LRVITAVILGGASLAGGQGRIVGALLGTVFMGIISNVMVLSRVSGYWQEIILGAILIVAI
WFDIVLKGPLMQQRLRSKGGVLKKVLILFPLWVAGGWALSSCEGPPRDTTAAESTAVNEA
DYAMTEATADEEYVMVTAATSLPLFVTHDQAAFRAWGKARGVKVSIVGPTDWNVPAQIEA
IEQVIATKPAGMLINGTDLGIANAINKAVEAGIPTVVYDSEIPSKRHCFLGSDWYQMGLK
QGEAIVKLANGKKGKVACVGILGQSNQEEGFRGLQEALKKHPNLQFLGKFETHNSTEETA
RVTSDLISSYPDLVAIAGFTSETGPGIGLGIKEMNRVGKVIGTNVDAGPILLKLLKEGVL
QLLVEQKRETFVWYGAQFLFDMVHNVNAFPKNYIQAGSHALPYSVNTGIIEINKDNVDNF
IK
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgaaatacctgcaagaccgaatctttaccttatctgtgctcatcgtattggtgtgcata
ggagcgtcgatggcctttccccaacagtttcctacgtttgagaatttcagccaaatcctg
ctcaatgtctccattgaaaccattgtggcggtggggatgatggtgttgatgattacgggc
gtctttgatctttcggtaggttcggtcgtggccctctcgggtggtttagcagcttatttg
atggtcaatatgggtatctccatgccggttgcggtattggcaggcgtattggcttcgttg
gccgtaggctgggtcaatgggtattttatcgccaaggtagggatcaatccgttgattcaa
actttggccacaatgggcatggtgcgagggctggcattgatgattgcgggggccggtatt
caaaatttgccgtatgaattcatttatatcggtcaaagtaaactgctgaaaattcagtct
cccgtttggtggatgttggctgttgtgttgatttttcatttgcttaccacccgcaccgtt
ttctttcgccgttactattacattggcggtaacgaaaaagcggctgatttatcgggaatc
cgagtgcgcaaaatgaagcattacgcatttattctatccgcattgttggcaggaatcgcc
gggattttaattgcttctcggctgggttcggccattgcttccattgggaaaggcatggag
ctacgggtcattacggccgtgatcttgggcggagccagtttggcgggaggccagggtcga
attgtcggagccttgttggggacggtatttatgggtattatttccaacgttatggtgctc
tccagagtgtcggggtattggcaggaaatcattttgggggcgatcctgattgtagccatt
tggtttgatatagtgctcaaaggacccctaatgcagcaacggctgcggtcaaaaggggga
gtactgaagaaagtattgattttgtttcccctatgggtagcagggggctgggcattatcg
tcctgcgaaggcccgccccgtgatacaacggctgctgaaagcactgccgtcaatgaagct
gattatgccatgaccgaagccactgccgacgaagaatacgttatggtgactgcggcgacg
agtttgccgttgtttgttactcacgaccaagcggcgttcagagcatgggggaaagcacga
ggcgtgaaagtaagcattgtggggcctaccgactggaacgtgccggcacaaattgaggcc
atagagcaggtgattgccacaaagccggccggaatgctcatcaacggcaccgatttgggt
atcgccaatgccatcaataaagccgttgaagcgggtatcccgaccgtcgtgtatgattcg
gaaataccgagcaaacggcattgttttttgggctcggattggtatcaaatggggttgaaa
cagggcgaagcgattgtgaaattggcgaatggaaaaaaagggaaagtagcctgtgtgggc
atattgggtcagagcaatcaggaagaaggtttcagggggttgcaggaggcgttgaaaaaa
cacccgaatctgcaatttttaggcaaatttgaaacccataattcgacggaagaaacggcg
cgcgttacctccgatttgataagcagttatccggatttggttgctattgccggttttacc
tctgaaacaggcccggggattgggttaggaattaaggaaatgaaccgcgtcggcaaggtt
atcggtaccaatgtagatgccggaccaatattgcttaaattgttgaaagaaggcgtatta
caattgttagtggaacaaaaacgggaaacgtttgtgtggtacggagcccaatttttattc
gatatggttcacaacgtcaatgcctttccaaaaaactacattcaggcaggaagccacgcg
ctgccgtactcggtcaatacgggtattatcgaaatcaataaagataatgtagataacttc
atcaaataa
DBGET
integrated database retrieval system
