Runella slithyformis: Runsl_3824
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Entry
Runsl_3824 CDS
T01553
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
rsi
Runella slithyformis
Brite
KEGG Orthology (KO) [BR:
rsi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsi03400
]
Runsl_3824
DNA repair and recombination proteins [BR:
rsi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Runsl_3824
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
DnaB_C
AAA
DUF7125
ChlI
Lon_C
AAA_22
AAA_24
AAA_16
AAA_14
AAA_5
NTPase_1
nSTAND_NTPase5
SLFN-g3_helicase
CobU
nSTAND3
NACHT
DAP3
DZR
RNA_helicase
DUF7129
MCM
DUF8106
ABC_tran
Rad51
RuvB_N
RsgA_GTPase
HypA
Motif
Other DBs
NCBI-ProteinID:
AEI50182
UniProt:
A0A7U3ZMY1
LinkDB
All DBs
Position
complement(4412166..4413533)
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AA seq
455 aa
AA seq
DB search
MAKVKTAYFCQSCGHQSPKWLGRCPSCGEWNTLVEEVLEKEDKKGPLAQWKSVSLASKPK
AIVEIKYEEEPRIVTIDAELNRVLGGGIVLGSLVLIGGEPGIGKSTLMLQIALTLTQRVL
YVSGEESEQQIKMRAERLTSKNHNCFILTETSTDNIFRQIEEFNPDVLIIDSIQTMQSSL
IESGAGSVSQVRQCASELMKYAKESGVPVFMIGHITKDGSLAGPKTLEHMVDTVLQFEGD
RHTTYRILRTTKNRFGSTSELGIYEMLGTGLRQVTNPSEILISQREEQLSGITIGSMLEG
NRPLMIEIQSLVSVANYGTPQRSSTGFDNKRLQMLLAVLEKRGGFRLGTQDVFLNVAGGL
RVEDPAIDLAVVTSIASSFEDGFVPPSVCFAGEVGLGGEVRAVSRIEGRIAEAEKLGFKK
IFISKYNTKGVIFKNYDIKIIPVAKLDEVFGELLR
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagtcaaaaccgcttatttttgtcaaagttgtggtcatcagtcacccaaatgg
ctcggacgatgcccctcctgcggcgaatggaacaccttggtagaagaagttctcgaaaaa
gaagataaaaaagggcccttggcgcagtggaaatcggtgagcttggcctccaaacccaaa
gccattgtcgaaataaaatacgaagaagaaccgcgtattgtcacgatagatgccgagctt
aaccgcgtcctgggcggcggtatcgtgctgggttcgttggtgctcatcggcggggagccg
ggcatcggaaaatcgacactgatgctgcaaattgcgctgacgctcacccaacgcgtgctg
tacgtgtcgggggaggaaagcgagcagcagatcaagatgcgcgccgaacggcttacgtcc
aaaaaccacaattgctttattctaacggaaacgtcgaccgacaatatcttccgccaaatc
gaagaattcaatccggatgtgctgatcattgactccatccaaaccatgcaatcgtcgctc
atcgaatcgggcgcgggcagcgtatctcaggtgcgtcagtgcgcgtcggaattgatgaaa
tacgccaaagaaagcggcgtgccggtatttatgatcggacacattaccaaagacggcagc
cttgccgggcccaaaaccctggagcacatggtcgataccgtgcttcagtttgaaggcgac
cgccacaccacctaccgaatcctgcgtaccaccaaaaaccgcttcggaagcacctcagaa
ctggggatttacgaaatgctcgggaccggcctgcgtcaggtgaccaacccctcggagata
ttgatctcgcagcgcgaagagcaattgagcggtattaccatcggctccatgctcgaaggc
aaccggccgctgatgatcgagatacagtcgctggtaagcgtagccaactacggaaccccg
cagcgcagcagcacgggatttgacaacaaacgccttcagatgctgttggccgtattggaa
aaacgcggcggttttcgcttaggtacccaagacgtttttctcaacgtggcgggtggcctg
cgcgtagaagaccccgccattgatttagccgtcgtgacctctattgcctcatcctttgaa
gatggttttgtgccgccttcggtgtgttttgcgggagaagtgggcctgggcggggaggtt
cgtgccgtaagccgcatcgaagggcgcattgccgaagcggaaaaactgggctttaagaaa
atatttatttccaaatacaacaccaaaggggtgatcttcaagaactacgacattaagatc
atccccgtcgcgaagttggatgaggtatttggggaattgctgcggtag
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