Runella slithyformis: Runsl_4020
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Entry
Runsl_4020 CDS
T01553
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
rsi
Runella slithyformis
Brite
KEGG Orthology (KO) [BR:
rsi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rsi02000
]
Runsl_4020
Transporters [BR:
rsi02000
]
Other transporters
Pores ion channels [TC:
1
]
Runsl_4020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
AEI50373
UniProt:
A0A7U4E779
LinkDB
All DBs
Position
complement(4645442..4647598)
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AA seq
718 aa
AA seq
DB search
MIISTKKQFPTFSQKIDMPLTLSLFTSQLRFFRPFHSKLCVIAGLLFSLTGVAQKKDSLR
TLSLSPVTVTTTRLETNEKRLPAALTVLDGSRIQIGQPQLSLFESLGGVAGLFAQNPDNF
NQDLRISIRGFGARAAFGIRGIRLVVDGIPESTPDGQADVDNLDMGAMRRLEVMRGPSSG
LYGNAAGGVISLQTDNADDMPAVEGQATVGSYGFKSFRVKTGGQKGKFQYVFIGTHNQSD
GYRGNSRMESSIFNLKLRYDFDSLTRLSVLANYGISPEADDPGGLTLAQVKENRRQAHPN
NLRFLATESVNQGRIGIIFEKRMGKSLIFARVFGTKRDFANYLAFQAAGAGTINRAFAGA
SWQYQYTQHFGELLYRFRLGVDYETQADTRRRFDNLTGVRGKLTFDQVESFKNIAAYITQ
ELSSRKFTLLTGLRSDAIRMKAEDAFLTDGDQSGKRQYSRLNPTLGVSYELSSTVNLYTN
LGTSFETPTLSELSNNPSGTGGLNPELKPQRATNYEIGAKTYFNPRIRVDVALFNINVED
ELVPYQITGQAGRVFFRNAGSSRRQGIELSFNTILAKGLSLFTNYTYSDFTYRNYKTTAG
EFNGNTLPGIPKHAAQAELRYFRPSGLFVIAQVRHASDLYADDANTVTANSYTNLNMRIG
GTFRFGQVGIEPFIGVNNLLNTVYFQNVQINAANGRFFEPAQGQFWFGGAKVNLQKKS
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgattatttccacaaaaaaacaatttcccaccttttcacaaaaaatagatatgccgttg
actttgtcgcttttcacttctcagttacgttttttcaggccttttcattcaaagctatgt
gttatcgccggtctgttattttcactgacgggcgttgctcaaaagaaagactccctccga
acactctcattatcgcccgttactgtcaccacaacccggttggaaaccaatgaaaaacga
ttgcccgccgccctgacggtgcttgacggcagccgtatccagatcgggcagccgcaactc
tctctgtttgaatccctgggcggtgtggccgggctgtttgcccaaaatcctgacaatttt
aaccaagacctgcgaatatccattcgggggtttggcgcgcgggccgcgttcgggattcgc
ggcatccgattggtggtggatggaattcccgaatctacgcccgacgggcaagctgatgtt
gacaacctcgacatgggagccatgcggcgattggaagtaatgcgcggcccttcgtcgggc
ctctatggcaatgctgccggcggggtgatcagtctgcaaaccgacaacgccgacgatatg
cccgcggtagaaggtcaggctaccgttggctcctatggttttaaaagttttcgcgtaaaa
acaggtgggcaaaaagggaaatttcagtacgtttttatcggaactcataatcaatccgac
gggtatcgcggcaacagccgcatggagagcagcatttttaacctcaaacttcgctatgat
tttgattcactgacgcgcctatcggtactggccaattatggcataagtccggaagcagac
gacccgggcggactgacgttggcgcaggtaaaagaaaaccgccgacaggcgcacccgaac
aaccttcgttttctggcgacggaatcggtcaatcagggacgtatcggtattattttcgaa
aaacgaatgggcaaaagtctgatttttgcgcgggtgttcggcactaagcgcgattttgcc
aattatctggcctttcaggctgccggagccggcaccatcaaccgtgcctttgcaggggcg
agctggcaatatcaatatacccagcacttcggagagttgttgtaccgttttcgcctgggg
gtggattatgaaacgcaggctgatacccgccgccgtttcgacaacctaacgggcgtacgc
ggaaagctgacctttgaccaagtggaatccttcaaaaacattgccgcctacattacgcag
gagctcagctcccgtaaatttacgctgctcaccggtctgcgctcggatgccattcgaatg
aaagcggaagatgcttttctgaccgacggtgaccaatcgggcaagcgtcaatacagtcgc
ctcaatcctaccctcggcgtatcgtatgaactgtcttccaccgtaaatctttacactaac
ttaggcaccagttttgaaacgcccacactcagtgaactttccaacaatccatcaggtaca
ggcgggttgaatccggagctgaaaccacagcgtgccaccaattatgaaatcggggccaag
acctactttaatccccgtattcgtgtagacgtggcattgtttaacattaatgtcgaagat
gaattggtgccctaccaaattaccggacaggcgggccgtgttttttttcgtaatgcaggc
agctcccgtcggcagggaattgagctgagctttaatacgattttagccaaaggattgtca
ctctttaccaattatacttactccgattttacctatcgcaattacaaaaccaccgccggg
gaattcaacggcaacacgctgccgggcattcccaaacacgccgcgcaggctgaactgcgg
tattttcgcccgtcgggtctgtttgtcattgctcaggtacgccatgcttccgatctctat
gccgacgatgccaacacggtgacggccaacagctataccaatcttaacatgagaatcggt
ggtacttttcgtttcgggcaagtagggattgaaccttttatcggggtaaataacctttta
aataccgtttattttcaaaatgtccagatcaatgctgccaacggacggttttttgaaccg
gcacagggacagttctggtttggaggggctaaggtaaacctccaaaaaaaatcataa
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