Runella slithyformis: Runsl_4021
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Entry
Runsl_4021 CDS
T01553
Name
(GenBank) HhH-GPD family protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
rsi
Runella slithyformis
Pathway
rsi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rsi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Runsl_4021
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsi03400
]
Runsl_4021
Enzymes [BR:
rsi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
Runsl_4021
DNA repair and recombination proteins [BR:
rsi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Runsl_4021
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
DUF7411
DUF6123
Motif
Other DBs
NCBI-ProteinID:
AEI50374
UniProt:
A0A7U3ZNC9
LinkDB
All DBs
Position
4648032..4648634
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AA seq
200 aa
AA seq
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MIAETYLASNDAIMASIIETTPMFKKVDWNHDVYLALLESIVSQQISVKAADSIFTRFRA
LFDDAYPHPESLLSKTAEELRSAGLSLQKIKYLQNVALFAIENGIDYEKLQKLTDEEIVR
YLIPIKGVGRWTVEMLLMFVMDRPDVFPIDDLVIRQKMVRAYNLTETGRALYKELHVIAE
NWRPYRTMACHYLWRWKPEL
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgattgccgaaacctacctcgcttccaacgatgccataatggcatccattattgaaact
acgccgatgttcaaaaaagtggattggaaccatgatgtgtatttagcgctgctggaaagc
attgtttcccaacagatttcggtcaaagctgccgattcaatctttacccgtttcagggca
ttgtttgacgatgcttatccgcatcccgaatcccttttaagtaaaacagctgaagaatta
cgaagcgcgggactgtctcttcagaaaataaagtacctgcaaaatgtcgcgctttttgcc
atcgagaatggtattgattatgaaaaacttcagaaacttactgatgaggagatcgtccgg
tacctgattcccatcaaaggcgttgggcgttggacggtagagatgctgctgatgtttgtc
atggaccgtccggatgtatttcccattgacgatctggtaattcgacaaaagatggtaagg
gcctataatctgaccgaaacgggtcgtgctttatacaaagagcttcatgtcattgccgaa
aattggcggccctaccggaccatggcctgtcactatttatggcgctggaaacccgagctt
taa
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