Runella slithyformis: Runsl_4096
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Entry
Runsl_4096 CDS
T01553
Name
(GenBank) polysaccharide biosynthesis protein CapD
Organism
rsi
Runella slithyformis
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GFIT
Motif
Pfam:
Polysacc_synt_2
Epimerase
RmlD_sub_bind
GDP_Man_Dehyd
3Beta_HSD
NAD_binding_4
PglD_N
KR
CoA_binding_3
adh_short
C2185-like_N
NmrA
NAD_binding_10
Csm1
DUF4947
Motif
Other DBs
NCBI-ProteinID:
AEI50443
UniProt:
A0A7U4E7L6
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Position
complement(4728899..4730836)
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AA seq
645 aa
AA seq
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MIEQLLTKYSNRFVSRHLILAIDITVVIVAFVIACILRVNFEIYKVNWSIYKYYLLGLLI
NRIFFFLYFRSYTGIVRHTSFEDTSLIFKAITTSSVLTLVFSIALSRSTDNNLFYIPISI
LIIDYFISLFLMIASRLLVKNIYKTLIINAPGEKVNVLIYGAGELGILIKNTLLRNRHKK
YNILGFIDDNPSLSFKTLEGVVVYPEADADIRFIEGSNPEDIEVILAINDIKPYRKNQII
ERFLKRDIIVKVAPSIYDRLGNEELKSEEIRNIRIEDLLERDPIQLDNQSISRQLAGRVA
LVTGAAGSIGSEIIRQLIRFQPQTLILLDQSESGLYDLENELKQQFQHYLGDGTMVIVKV
ADVTDEVRMRHIFSHWLPHFVFHAAAYKHVPLMEDHPYEAIKVNVFGTKILADLAVEMGV
NKFVMISTDKAVNPTNVMGATKRLAELYVQSLNQRFPNDTRFITTRFGNVLGSNGSVVPL
FQKQIQAGGPITVTHPDVIRYFMTIPEACQLVLEAGSMGKGGEIFVFDMGEPVKITDLAQ
KMIKLSGLRLEKDIQIIYTGLRPGEKLYEELLSDKERTVATYHPKIQIAQVYTPPFTEIT
SSLQDLRKAMREGDKTLMVMNLKTIVPEFVSNNSLYEELGGLEFS
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgattgagcaattgttgactaaatattctaaccgttttgtatcacgacatttgatatta
gccattgatataaccgtcgttattgtcgcttttgtaattgcctgtatactccgagtcaat
tttgaaatttataaagtcaattggtcgatctataaatactaccttttggggcttctaatc
aaccgaatctttttctttctctattttcggtcgtacactgggattgttcgccacacaagt
tttgaggatacctctcttatttttaaagccatcacgaccagcagtgttctgacactcgtt
ttttcaattgccctctctcgctccaccgacaacaacctcttctatattcccatctccatt
ctcatcattgactattttatatcgctctttttgatgatcgccagccgattattagtcaaa
aatatctacaagaccctaattatcaatgccccgggagagaaggtaaatgtacttatttac
ggagcgggagaattgggtattttaatcaaaaataccctgcttagaaatcggcataagaaa
tacaatattctggggttcattgatgataatccatcattgagttttaaaacactcgaaggg
gtagttgtctacccggaagcagatgccgacattcgttttattgaaggcagcaatccggaa
gacattgaagtcattttagccattaacgatatcaagccttatcgcaaaaaccagatcatt
gaacgttttttgaaaagagatatcatcgtcaaagtagctccctccatctatgaccgcctg
ggcaatgaagaattaaaatccgaagaaatacgaaacattcgcattgaagatctactggag
cgtgaccctatccaactagacaaccaaagcatcagccgtcagttggccggaagagtagcg
ctggtgacgggagccgccggttccattggtagtgagatcattcgccagttgattcgcttt
cagccccaaacgctgatcctactcgaccagtcggaatcgggactctatgatttggaaaat
gaattgaagcaacaatttcagcactatttaggcgacggaacgatggttattgtaaaagtg
gccgatgtcaccgatgaggtacgaatgaggcatattttcagccattggctgccgcatttt
gtgtttcatgcggcggcgtacaaacacgtaccgctcatggaagaccatccgtatgaagcc
attaaggtcaatgtgtttgggacaaagattctggccgacctcgccgttgaaatgggcgtg
aataaatttgtaatgatttcgaccgacaaggcggtaaaccctaccaatgttatgggagcg
accaaacggttagccgaattatacgttcaaagcctgaatcaacgtttccccaatgataca
cgttttattacgacacgatttggcaatgttcttgggtcaaacggctcggtggtgccgctc
tttcaaaaacaaattcaggcgggtggtcccatcacagtcacgcatcccgatgtcatacgg
tatttcatgacaatcccggaagcctgtcaattggtacttgaagcgggtagcatgggcaaa
ggcggcgagattttcgtttttgacatgggcgagcccgttaaaatcaccgatctggctcag
aaaatgatcaaactctcagggctgcgccttgagaaagacattcaaattatttacaccgga
ctgcgtcccggcgaaaaactttacgaagagctcctcagcgacaaggagcgaaccgtggca
acctaccacccaaaaatccagatcgctcaggtatatacccctccctttaccgaaatcacc
tcttctctacaggacctgcgaaaggcaatgcgcgaaggtgacaaaacactgatggtcatg
aatttaaaaacgattgttcctgaatttgtaagtaacaactccctttacgaggaattgggc
ggcttggaattcagttaa
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