KEGG   Runella slithyformis: Runsl_4116
Entry
Runsl_4116        CDS       T01553                                 
Name
(GenBank) Alanine racemase
  KO
K01798  Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
Organism
rsi  Runella slithyformis
Pathway
rsi00300  Lysine biosynthesis
rsi00470  D-Amino acid metabolism
rsi00550  Peptidoglycan biosynthesis
rsi01100  Metabolic pathways
rsi01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:rsi00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    Runsl_4116
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    Runsl_4116
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    Runsl_4116
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    Runsl_4116
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:rsi01011]
    Runsl_4116
Enzymes [BR:rsi01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.1  alanine racemase
     Runsl_4116
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.10  UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
     Runsl_4116
Peptidoglycan biosynthesis and degradation proteins [BR:rsi01011]
 Precursor biosynthesis
  Amino acid ligase
   Runsl_4116
  Racemase
   Runsl_4116
SSDB
Motif
Pfam: Ala_racemase_N Ala_racemase_C Mur_ligase_M Mur_ligase DLIC
Other DBs
NCBI-ProteinID: AEI50463
UniProt: A0A7U4E7A9
LinkDB
Position
complement(4745274..4747772)
AA seq 832 aa
MTATIFQTSPIATDAVYLLTDSRQLIFPQQTLFFAIKGVRHDGHQFITDLYQKGVRQFVV
EQNSLTDSLLTTLESFENTQIWTVESSLKALQDVAKQHRAQFDIPVIGVTGSNGKTIIKE
WLGQLLSADYRIAKSPKSYNSQIGVPLSVWQLNDTHTLGIFEAGISQLHEMKSLQEIIQP
SIGIFTNIGSAHDEGFRSRKQKVTEKLRLFTQCKQLIYRADYSDIDEEIRLILKSVNPKC
ELISWGSAENALVKAEWHQDTDQTYIVLNSVLEHYDNQLFAIPFTDEASVENCIHCLILM
LTLGIPSTEIRQRVARLRPISMRLELKEGINNCYLIDDTYNNDLVGLTIALNFLSQQEQR
PHKMAILSDLLQTGQKEEELYTQINTLLQQKGVQQLIAIGAAFVRNAHWIQVEASYFADT
DDFLTKFPLQSFNNSLVLIKGARPFQFERIVHRLQQKVHGTVLEINLDALTHNLNFYRSR
VGNDTKIMVMVKAFAYGNGSAEVAQLLQFHRVDYLAVAYTDEGVLLRQNGIELPIMVMNP
TASTFDKLIEYKLEPEIYSHKILDEWLNFQPTLPLSDEEIDAVYPQVPIHLKLDTGMHRL
GFTQADLPLLLYQLQQNPSLKVASVFSHLAGADEAVHNEFTRQQFELFSSGAELLEQTLG
YRPLRHLLNSAGIVRFPEYKLDMVRLGIGLYGVEVNRLEQRSLQQIGTFKTVVSQVKHLL
PGDTIGYGRMGVLEKESFIATIALGYADGYDRRFSKGIGKVLINGALCPVVGNVCMDMTM
VDATGVNVQEGDEVIIFGNDLPISQLADQIGTIPYELLTGISERVKRVFYKE
NT seq 2499 nt   +upstreamnt  +downstreamnt
atgaccgcaaccatttttcaaacctcgccgattgctaccgatgcagtgtatttgctgacc
gacagccggcaattgattttcccccaacagaccctattctttgccattaagggcgtaagg
cacgacggtcatcagtttattacagatctttatcaaaaaggcgttcgacaatttgtagtg
gagcaaaactcgttgacagattcactgctgaccactcttgaatcgtttgaaaatacccaa
atttggaccgtagaaagtagccttaaagccctacaggatgttgccaagcagcaccgggcc
caatttgacataccggtcatcggcgttacgggcagtaatggcaaaactatcatcaaagag
tggctgggccaattactcagcgctgactatagaattgcaaaaagtcccaaaagttataat
tcacagatcggtgtgccgctatcggtgtggcagctgaatgatacgcatactttggggatt
tttgaggcggggatttcacaactccacgaaatgaaatccctacaggaaatcattcagcca
tccatcggtatctttaccaacatcggctccgcgcacgatgagggctttagaagccgtaag
cagaaagtaaccgaaaagttgcgtcttttcactcagtgtaaacaacttatctaccgcgct
gattactctgatattgacgaagaaattcgtctgatcttaaaatccgttaatcccaaatgt
gaactcatcagttggggctccgctgaaaacgcgttggtaaaggccgagtggcaccaagac
accgaccaaacttacatagtgttgaactcggtcttggagcattatgataatcaacttttt
gccataccatttacggatgaagcttctgtagaaaactgcattcattgcctgattttgatg
ctcacacttggcattccatcgacagagatccggcagcgggtagcacgcctgcggccgatc
tccatgcgacttgagctgaaagaaggcatcaacaattgctatttgattgatgatacgtat
aacaatgacttagtggggctaacgattgcgctcaattttttaagccagcaggaacaacgg
ccacataaaatggctattttatccgatctgctgcaaacggggcaaaaagaagaagaactt
tacacccaaatcaacacgctgcttcaacaaaagggcgttcagcaactgattgccatcggc
gcagcgtttgtgcgaaacgctcattggattcaggtagaagcaagctattttgccgatacc
gacgattttttgaccaagtttcctcttcagtccttcaataacagcttggtgctgatcaaa
ggtgcccgtccgtttcaatttgaacgtatcgtgcatcgcctgcaacagaaggtccacggg
acggtattggaaatcaacctggacgcgcttacgcacaatctcaatttttaccgtagccgg
gtggggaatgacaccaaaatcatggtcatggtcaaggcctttgcctatgggaacgggagc
gcagaagtggcccaactattacagtttcatcgagtggattatttggccgtagcctacacc
gacgaaggcgtgcttttacgtcaaaacgggattgaattacctattatggtaatgaatcct
acagcatctacctttgacaaactgattgaatataaattggagccggaaatctacagccat
aagattttggatgaatggctaaatttccaacccacccttcctctttccgatgaagaaatt
gacgctgtctacccgcaagtgcccattcacctcaagctcgataccggtatgcaccgattg
ggattcacccaagctgatctgcccttgttactttaccaattacagcaaaatccatcgctg
aaagttgcctctgttttcagtcatttggcaggtgcagatgaagcggtccacaatgagttt
acgcggcaacaatttgagctttttagttcgggggctgaactgcttgaacaaacgcttggg
tatcgaccgttgcgccacctgctcaattcggccggaatcgtacgttttccggaatataaa
ctggacatggttcggctgggaatcggcctttacggagtagaggtcaatcggctggaacaa
cgctcattgcagcaaataggcacttttaaaacagtggtgtctcaggtaaaacaccttctt
ccgggcgataccatcggatacggtcgcatgggtgtacttgaaaaagaatcttttatcgca
accattgcgctaggctacgccgatggctacgaccgacgtttcagcaaaggaataggaaaa
gtgcttatcaacggggcattatgtccggtggtaggaaatgtatgcatggatatgaccatg
gttgatgcgacgggtgtaaacgtacaggagggcgatgaagtaattatttttggaaatgat
ctgccaatctcacaattggcagatcaaatcggcaccattccttacgagcttctgaccgga
atcagtgagcgggtcaaacgcgttttttataaagaataa

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