Runella slithyformis: Runsl_4166
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Entry
Runsl_4166 CDS
T01553
Name
(GenBank) aspartyl-tRNA synthetase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
rsi
Runella slithyformis
Pathway
rsi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rsi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Runsl_4166
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rsi01007
]
Runsl_4166
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rsi03016
]
Runsl_4166
03029 Mitochondrial biogenesis [BR:
rsi03029
]
Runsl_4166
Enzymes [BR:
rsi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
Runsl_4166
Amino acid related enzymes [BR:
rsi01007
]
Aminoacyl-tRNA synthetase
Class II (A)
Runsl_4166
Transfer RNA biogenesis [BR:
rsi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Runsl_4166
Prokaryotic type
Other AARSs
Runsl_4166
Mitochondrial biogenesis [BR:
rsi03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
Runsl_4166
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
tRNA-synt_2b
Motif
Other DBs
NCBI-ProteinID:
AEI50510
UniProt:
A0A7U3ZNK5
LinkDB
All DBs
Position
4797742..4799499
Genome browser
AA seq
585 aa
AA seq
DB search
MLRTHTCGELRISDVSKEVILSGWVQRTRDKGGMIWIDLRDRYGITQLMLEEGKTAPEII
AQARNLGREFVVQATGVVTERFAKNDKMATGDIEIKLTGLTVLNSAKLPPFQIEDKTDGG
DELRLKYRYLDLRRDIVRKNLELRHKVAQQTRLYMDAQQFIEVETPVLIKSTPEGARDFV
VPSRMNPGEFYALPQSPQTFKQLLMVSGFDRYYQIVKCFRDEDLRADRQPEFTQIDCEMS
FVTQEDILQMFEGLIRHLFKAVKGIELPEVPRMTYANAMKKYGSDKPDIRFGMEFVELKG
DTDLVLGKNFGLFDSAELVAGVCAKGCAEYTRKQMDELTDWVKRPQIGAKGLIYVRYNTD
GTLKSSVDKFYGEDDLKQWAEAFGAQPGDLMLIMAGEANKTRKQLNELRLEMGSRLGLRN
SDDYKVLWVVDFPLLEYGEEEQRWFAMHHPFTSPKPEDIPLLTTDLGAVRANAYDMVING
TEVGGGSVRIFQRPLQMQMFEILGFSPEEAKAQFGFLMEAFEFGAPPHAGIAFGFDRLCS
IFGGVDSIRDFIAFPKNNSGRDVMIDSPSTIDQKQLDELKIATKA
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgcttagaacgcacacttgcggagaactccgtatttcagatgtcagtaaagaagtaatc
ctcagcggttgggtacaacgtacgcgcgacaaaggaggtatgatttggattgacctgcgc
gaccgttacgggatcacccagttaatgctcgaagaaggcaaaaccgctcccgagattatt
gcacaggcccgtaatttaggccgtgagtttgtggtacaggccacgggcgtggtgaccgag
cgctttgccaaaaatgataaaatggccacgggagatattgaaatcaaactgacggggctg
acggttttaaattcggccaaactgcctccttttcagatcgaagataaaaccgacggcggg
gatgaactgcgcctcaagtaccgctatcttgacctgcgtcgtgatattgtgcgcaagaac
ctggaattgcggcataaagtggctcaacagacgcggttgtacatggacgctcagcaattt
atcgaagtcgaaacccccgttttgatcaagtcaacccccgaaggagcgcgtgattttgtg
gtaccgagccgaatgaatcccggtgagttttatgcgttgccgcagtcgccgcaaacgttc
aagcaattattgatggtgtcgggatttgatcggtattatcagatcgtaaaatgtttccgt
gacgaagatctgcgagccgatcgccagcccgaatttacgcagatagactgtgaaatgtcg
tttgttacgcaggaagatatcctgcaaatgtttgaagggctgattcgtcatttatttaaa
gccgtaaaagggattgaattgccggaagtgccgcgcatgacctacgccaatgccatgaaa
aaatacggctccgataaacccgatattcgttttggaatggagttcgtagagttgaaaggc
gatacggaccttgttttgggtaaaaatttcgggttgtttgattccgccgaattagtagcc
ggcgtttgtgccaaaggctgtgctgaatacacgcgtaagcaaatggatgagctcacagac
tgggtcaaacgaccgcaaattggagccaaagggttgatctatgtgcgctacaataccgac
ggaactcttaaatcatccgttgataagttttacggtgaggacgatttgaagcaatgggcg
gaagcgtttggggcacagccgggcgatttgatgctcatcatggccggagaagctaataaa
acacgtaagcaactgaatgaactccgtttggaaatgggcagtcgtttagggttgcgtaat
tctgatgattataaagtactgtgggtagttgattttccattgttggagtacggcgaagaa
gaacagcgctggtttgccatgcaccacccctttacgagtccgaagccggaagatattccg
ctgctgacgaccgatttgggcgcggtacgggccaatgcgtacgatatggtcatcaacggg
acggaagtaggaggtggatcagtacggattttccaacgtccgctgcaaatgcagatgttt
gaaattctcggctttagccccgaagaagccaaagcacagtttggcttcctgatggaagcg
tttgaattcggcgcgccgccgcacgcaggtattgcttttggatttgaccgcctgtgctct
attttcggcggtgtggattccatccgcgatttcattgctttccctaaaaacaattccggg
cgtgatgtcatgatcgattctccttctaccattgaccaaaaacaattggatgaattgaag
atcgcgacgaaggcgtaa
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