Runella slithyformis: Runsl_4176
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Entry
Runsl_4176 CDS
T01553
Name
(GenBank) TonB-dependent receptor
KO
K16087
hemoglobin/transferrin/lactoferrin receptor protein
Organism
rsi
Runella slithyformis
Brite
KEGG Orthology (KO) [BR:
rsi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rsi02000
]
Runsl_4176
Transporters [BR:
rsi02000
]
Other transporters
Pores ion channels [TC:
1
]
Runsl_4176
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
DUF997
Motif
Other DBs
NCBI-ProteinID:
AEI50520
UniProt:
A0A7U3ZNM0
LinkDB
All DBs
Position
complement(4809035..4811224)
Genome browser
AA seq
729 aa
AA seq
DB search
MKYIVYLAFIIKILPVFSQQTNLRSDTLQLDEVVISAGKFEQQKRTLPFQIEQISAKQIA
FRNSQNAADMLMQTGQVFVQKSQGGGGSPVLRGFEANRILLVIDGVRMNNAIFRGGHLQN
VLRIDQSMLERTEILLGPSSVVYGSDALGGVIHFRTLTPVLNSGLKGNAYVRYSSANREK
TGHINLSYGGVKWSYLGGFTYSDFGDVKQGAQRLSKYPTFGQLLSYPERQNGQDVAVTNP
DPNMQVGSGYSQRDFYHKFIFQPSEHTRHTLNVQYSTTGNVPRYDRLTEVASGLPRFAEW
YYGPEKRFLTSYQLDMTKRNALYDRAQLTVAYQDIEESRISRRFKNNNRKTQLEKVKVYT
LNYDALKRIGIQEWKYGVEATYNDVRSTAFTTNVSTNAIAGADTRYPNGGSQTRSVALYL
TDQISVRDKWHLHAGVRYSLMGLHSKFGSKEFFPFPFDDVKQSPNALSGNAGLVFTPSPK
TKVNVLFSTGFRTPNIDDLAKVFESTAGSLIVPNPGLTPEYTYNYEVGLSQWFGQIVRLE
ASAYYTQIRDAIVTDVFTLNGQSQIMYNGTLSKITANQNKRSAYIQGVNVNVFVKLSQSL
QFTANINRVVGKIKNDGGGTTPLDHIPPTYGRLSAVYQNKRFQAEVYSLYNGWKYISDYN
LGGEDNQQYATPDGMPAWMTLNARTSIEVAKSLSLQLACENILDRNYRYFASGISAPGRN
FVVTLRAKL
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgaaatacattgtctatttagcattcatcatcaaaattttacctgttttttcacaacaa
accaatctgcgcagcgatacgctccaacttgatgaggtggtgatttcggcgggaaagttt
gaacagcaaaaacgtacgctgcccttccaaattgagcagatatcagccaaacaaatcgcg
tttcgtaacagccaaaatgccgctgatatgcttatgcaaaccgggcaggtatttgtacaa
aaaagccagggcggcggtggtagtccggtgcttcggggctttgaagccaaccgtattttg
ctcgttatcgacggagtacgtatgaacaatgcgatctttcgcggcggtcacctccaaaat
gtactgcgcatcgaccaatccatgctcgaacgaaccgaaattcttctggggccgtcgtcc
gtggtctatggctctgatgccctgggtggcgttattcactttcggacgctcactcccgta
ctgaacagcggcctgaaaggcaatgcctatgtacggtattcatcggccaaccgggaaaaa
accggccacatcaacctgagctatggcggcgtaaaatggtcttatttaggtggattcacc
tattctgattttggtgatgtaaagcaaggtgcccaacgcctgagcaaatatccgaccttt
ggtcagcttctctcctatccggagcgccaaaacggtcaggacgtagccgtgacaaatcct
gaccctaatatgcaggtaggctccggctattcccaacgggatttttatcataaattcatc
tttcaaccttccgagcatacccgtcacacgttaaatgtgcaatattccaccaccggcaat
gtaccccgttacgaccgtctgaccgaagtggcaagcggtttgccgagatttgccgaatgg
tattacgggccggaaaagcgctttttgacttcttatcagttggatatgaccaagcgcaat
gcgctgtatgaccgtgcccaattgacggtggcgtatcaggatattgaagaaagtcggatt
tcaaggcggtttaaaaacaacaaccgcaaaacccagctcgaaaaggtaaaagtctatacc
ctcaactacgacgcccttaaacgtattgggattcaggaatggaagtatggagtggaagct
acgtataatgacgtgcgttcaacggcatttacaaccaacgtcagcaccaacgccatcgcg
ggtgccgatacgcggtatcccaacggtggcagtcagacgcgctcggtggcgctctacctg
accgaccaaatttcagtgcgcgacaaatggcacctgcacgcaggagtgcgttatagtttg
atgggtcttcattcaaaattcggcagcaaagaattttttccgtttccctttgacgacgta
aaacaatctcccaatgccctgtcgggcaatgccggtcttgtttttacgccttccccaaaa
accaaagtcaatgtactgttcagtaccggttttcgcacccccaatatagacgatctggca
aaggtgtttgaatctaccgccggcagtttgatcgttcccaaccccggactaacgcccgaa
tacacctataactacgaagtgggtctttctcaatggtttggtcagatcgtccgtttggaa
gcttcggcctattatacccaaattcgggatgcgattgtcaccgacgtttttacgctcaac
ggacaaagtcagatcatgtataacggcaccctgagcaaaataacggcgaatcaaaacaaa
aggagtgcttacattcagggggttaacgtcaatgtatttgtgaaactcagccaatcgctg
caattcaccgcaaacatcaaccgcgtggttggaaagatcaaaaacgatggtggcggcacc
accccgttggatcatatcccgcctacctacggccgcctgagtgctgtgtatcagaacaag
cggtttcaggcagaagtttattctctttacaatggctggaaatacatttctgactataac
ttgggcggagaagacaatcaacaatacgccacccccgacggtatgcctgcctggatgacc
ctgaatgcccgcacttcgattgaggtagccaaatcgctgtcattgcagctggcctgcgag
aatatccttgaccgcaactaccgctattttgcgagcggtatcagcgccccgggccgtaat
tttgtagtaacactgagggctaagctgtaa
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