Runella slithyformis: Runsl_4254
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Entry
Runsl_4254 CDS
T01553
Name
(GenBank) Alpha-L-fucosidase
KO
K15923
alpha-L-fucosidase 2 [EC:
3.2.1.51
]
Organism
rsi
Runella slithyformis
Pathway
rsi00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
rsi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
Runsl_4254
Enzymes [BR:
rsi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.51 alpha-L-fucosidase
Runsl_4254
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_95_cat
Glyco_hyd_65N_2
Glyco_hydro_95_C
DUF6911
DUF6424
Cytochrom_C_asm
Motif
Other DBs
NCBI-ProteinID:
AEI50597
UniProt:
A0A7U3ZNR9
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All DBs
Position
4907175..4909817
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AA seq
880 aa
AA seq
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MKCLFQNLRLLLFKNDVFLCVSAALVLMWSIGYAQQPHPAPNLKLWFTQPARIWEEALPL
GNGKTGAMVFGRVNRERYQLNDNTLWSGYPIEGNNPNGPTVLPEVRKAIFEGKYDKADSL
WKKMQGPYCARYLPMGDLHLDFGFRDSTATDYYRELDLNTAVAIVKYTVGGVTYTRETFI
SHPASVMVVRITANKKNSINMSAALSSRLRFSVLPGETNEIVLKGKAPKHVAHRAAEPQQ
IVYDDDPKGEGTNFELRVKAQTEGGKITNQNGKLLISGANAVTYYVAGATSFNGFDKSPG
REGKDPSVETNAILKKAGSQSYAQLKSAHISDYQRLFQRVSLDLGTDPEALKLPTDERLI
RQQNGPADTHLQTLYYQFGRYLLIASSRNGASGAAGTPANLQGIWNDHIQPPWGSNFTTN
INFEMNYWLAENANLSECHLPMLQFIGHLAVNGAKTAKVNYGINEGWITHHGTDIWAKTS
AGGGYEWDPRSRGSWSSWLMAGAWLSTHLWEHYQFTGDQTFLRDQGYPLMKSAAQFMLHW
LLEDGQGHLITNPSSSPENTVKISGKEYQITMASTMDMAIIRELFSDCIQAAKQLKTDAA
FQTQLEQAKARLYPYQIGQYGQLQEWYRDWDDPNDKHRHISHLFGLHPGHQINPRQTPEL
AAAAKKSLMQRGDVSTGWSMAWKINWWARLEDGNHAYKILRDGLSYVGPKSSSRNGEVLT
TQSGGGTYPNLFDAHPPFQIDGNFGGTAGITEMLLQSHTGEISLLPALPDAWPKGSVRGL
KARGNFDVDIRWEAGKLTQASIVSPLGGVCRLRTKVPVRVVELASLGEKTVESNPLNPVP
ETPPFAKKSTAALENVPLEESYVIEFQAEKAKRYTIIPNK
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgtctttttcaaaacctgcgtttacttttgttcaaaaatgatgtttttctttgt
gtatcggcagccttggtgttgatgtggtctatcggctacgcacaacagccccaccctgct
cccaacctgaaactttggtttacgcaacccgcccgtatctgggaagaagctctcccgctg
ggcaacggcaaaacgggggccatggtgtttggaagggtcaacagagaacgataccaactc
aacgacaatacgctgtggtcgggctatcctatcgaaggaaataatcccaatgggcctacg
gtcctgcccgaggtacgaaaagccatttttgaagggaaatacgacaaagccgacagcctc
tggaaaaaaatgcaggggccgtattgcgcccggtatttgcctatgggcgacctgcacctt
gatttcggattccgcgattcgaccgccaccgactattaccgcgagttggacctgaatacc
gctgtagctatagtgaaatacaccgttggcggcgtgacctacacccgcgagaccttcatc
agccaccccgcctcggtgatggtcgtgcgcattaccgccaataaaaagaacagtatcaat
atgagtgcggccctgagcagtcggttgagattcagtgttttgccgggcgaaacgaacgag
attgtcttaaaaggcaaagcgcccaaacacgtagcgcaccgcgccgctgagccgcagcag
atcgtatacgatgacgatcccaaaggcgaaggaaccaactttgaactgcgggtcaaagcc
caaaccgaaggcgggaagatcactaaccaaaacggtaagctgcttatttcaggagccaat
gccgtgacctattacgtggcaggggccacaagttttaacggatttgacaaatcgcccggg
cgggagggaaaggacccttcggtcgagaccaacgctattttaaaaaaagccggcagccaa
tcctacgctcaactcaaatcggcgcatataagtgactatcaacgtctttttcagcgggtt
tcgctggacttgggtacggatcctgaagcgctgaaattacccaccgacgagcgcttgatt
cgtcagcaaaatggcccggcagatacgcatttacaaaccctctactatcaattcggtcgg
tatttattgattgcaagttcgcgaaacggcgcttcgggtgcggccggaacgccggccaat
ttgcagggcatttggaacgaccatattcaaccgccctggggcagcaactttaccaccaac
atcaatttcgaaatgaactattggctggccgaaaatgccaatctgtcagaatgtcatttg
ccgatgctgcaatttatcggtcatttggccgtcaacggtgccaaaacagccaaggtcaat
tacggcatcaatgaaggctggatcacgcaccacggcaccgatatctgggccaaaacctcg
gcgggtggcggctacgaatgggacccgcgcagtcgcggcagctggtcgagctggctcatg
gcgggcgcgtggctgagcacgcatctgtgggagcattatcagtttacgggcgaccaaact
tttctgcgtgaccaaggctatccgctcatgaaaagcgcggcgcagttcatgctgcactgg
ctgctggaagacgggcaggggcatctgatcaccaacccgtcgtcgtcgcccgaaaatacc
gttaagatcagcggcaaagaataccagatcacgatggcttccacgatggacatggccatt
atccgtgaattgttcagcgactgtattcaggctgcaaagcagctgaaaacggatgccgct
tttcaaacccaactggaacaggccaaagcgcggctgtatccgtatcagatcggtcaatac
gggcaattgcaggaatggtaccgggactgggacgaccccaacgacaaacaccgtcatatt
tcacacctgttcggattgcatccgggccatcagatcaatccccgccaaacgcctgagttg
gcggcggcggccaaaaaatcactgatgcagcgcggtgatgtgagcacgggctggtcgatg
gcgtggaagatcaattggtgggcacgactcgaagacggtaaccacgcctataagatcctg
cgcgacggactttcgtatgtgggccccaaaagcagttcgcgaaacggtgaagtattgacc
acgcaatcgggcgggggcacctatcccaatttattcgatgcacacccgccgtttcagatc
gacggtaattttggcggtacagcgggcatcaccgaaatgttgctgcaaagccatacgggt
gagatcagcctgttgcctgccctgcccgatgcctggcccaaaggctccgtcaggggcctc
aaagcgcgtgggaattttgacgtggacatccgttgggaagccggtaaattgacccaagcg
agtatcgtttcgccgcttggaggcgtctgtcggcttcgtaccaaagtgccggtcagggta
gtggagttagcttcgttgggagaaaaaaccgtggaaagtaatccgttgaaccccgttcct
gaaacaccgccttttgccaaaaaatccacggctgcgttggaaaacgtaccattggaagaa
agctatgtcatagaatttcaggctgaaaaagcaaaacgttataccattattccaaacaaa
tga
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