Runella slithyformis: Runsl_4398
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Entry
Runsl_4398 CDS
T01553
Name
(GenBank) transcriptional regulator, AraC family
KO
K10778
AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:
2.1.1.63
]
Organism
rsi
Runella slithyformis
Brite
KEGG Orthology (KO) [BR:
rsi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rsi03000
]
Runsl_4398
03400 DNA repair and recombination proteins [BR:
rsi03400
]
Runsl_4398
Enzymes [BR:
rsi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.63 methylated-DNA---[protein]-cysteine S-methyltransferase
Runsl_4398
Transcription factors [BR:
rsi03000
]
Prokaryotic type
Helix-turn-helix
AraC family
Runsl_4398
DNA repair and recombination proteins [BR:
rsi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
Runsl_4398
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_binding_1
HTH_18
HTH_AraC
Methyltransf_1N
Sigma70_r3
Motif
Other DBs
NCBI-ProteinID:
AEI50727
UniProt:
A0A7U3ZP10
LinkDB
All DBs
Position
complement(5098311..5099162)
Genome browser
AA seq
283 aa
AA seq
DB search
METINEQQVLDYQRIEKAIRFIEQNFRQQPKVSEIANHVALSEFHFNRLFSRWAGTSPQR
FMRFLTKEFAKECLSKSDNLLHATFETGLSSTSRLHDLFVAYEAMTPAEYKSKGAGLTIQ
FGIHETPFGACLIAVTPRGITDLRFLSEDTADAVTEEVRRDWSNAEWIQNELITQVYIDQ
IFYQTTSRDVPLTMLLRGTNFQIKVWEALLRIPFGQLVSYDVIAQHIGQPKASRAVGTAI
GSNRIGFLIPCHRVLQKVGGIGGYRWGITRKKAILGWEMSRSS
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atggagacaatcaacgaacaacaggtacttgactatcagcgcatcgaaaaagcgatccgg
ttcatcgaacaaaatttcagacaacaacccaaagtcagcgagatcgccaaccacgtggcg
ctgtcggaatttcatttcaaccgccttttcagccgctgggccggcacgagcccgcagcgt
tttatgcgttttttgaccaaggaatttgccaaagaatgcctttccaaatccgacaacctg
ctccacgccacttttgaaacggggctttcaagcacgagccgactgcacgatctgtttgtg
gcctacgaagccatgacccccgccgaatataagtccaaaggggcgggcctcaccatccaa
ttcggtattcatgaaacacccttcggggcttgcctgattgccgttactccccggggaatc
accgatctgcggtttttgagcgaagataccgccgatgccgttactgaagaagtacgtcgg
gactggagcaatgccgaatggattcaaaatgagttgattacgcaggtgtacattgaccaa
attttttaccaaaccacttcccgcgacgttcccttaacgatgcttttgcggggcaccaat
ttccagatcaaagtgtgggaagccctgttgaggattccgtttgggcagttggtcagttac
gatgtaatagcgcagcacatcgggcagcccaaggcgagtcgggcggtgggaacggccatt
ggcagcaatcggatcggattcttgattccctgccaccgcgtactgcaaaaagtgggaggc
atcggtggctaccgctggggaattacgcgtaaaaaagcgattttaggctgggaaatgagc
cggagttcataa
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