Runella slithyformis: Runsl_4407
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Entry
Runsl_4407 CDS
T01553
Name
(GenBank) (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
rsi
Runella slithyformis
Brite
KEGG Orthology (KO) [BR:
rsi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rsi03016
]
Runsl_4407
Enzymes [BR:
rsi01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
Runsl_4407
Transfer RNA biogenesis [BR:
rsi03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
Runsl_4407
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
AEI50736
UniProt:
A0A7U3ZP17
LinkDB
All DBs
Position
5104593..5106050
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AA seq
485 aa
AA seq
DB search
MITSTLKILSEADKEACELVKVSEEELTVDKKRLFIESYGCQMNFSDSEIVAAVMRNADF
ATTSSEDSADVIFLNTCAIRDNAEQKVRNRLQYLNNLKKKRPGLIIGVLGCMAERLKTKL
LDEEKMVDIVAGPDSYRDLPRLVEEAETGQKAVNVFLSREETYADISPIRLNSNGITAYI
SIMRGCDNMCSFCVVPYTRGRERSRDPFSIVEEARLLFADGYKEVTLLGQNVDSYKWKKE
TAKDGESTANALPVSFAQLLEMVALIHPDLRVRFSTSHPKDITDDVLWTMKKYENICKYI
HFPAQSGNSRVLKVMNRTYDREWYIQKIDRIREVLGEDCGISTDMITGFCTETEEEHQDT
LSLMEYVKYDYAYMFAYSERPGTPAAKKLKDDVPEEVKKRRLQEVIAVQLKHSSERNKLA
LGKVHKVLVEGPSKRSEADLCGRNDQNKVVIFPREHYKKGDYVYVLVTDCSSATLLGKAV
EEVTA
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgattacttcaacattaaaaatactttcggaagccgacaaagaggcgtgtgaactggtc
aaagtaagcgaggaggagttgaccgttgataaaaaaaggctgttcatcgaaagctacggc
tgtcagatgaatttttcggacagcgaaatcgtggcggccgtgatgcgaaatgctgatttt
gccactacttcttcggaagatagcgccgatgttatttttctgaatacctgcgccatccgc
gacaacgccgagcaaaaagtgcgtaatcgtctccaatacctcaataatttaaagaaaaag
cggcccgggctgatcatcggagtattgggatgtatggcagagcgtttgaaaaccaagttg
ttggatgaagaaaaaatggtggacatcgtggccggacctgattcctaccgcgatttgccg
cgtttggtggaagaagccgaaacgggtcaaaaagccgtcaacgtatttctttcccgggag
gaaacttacgccgatatttcgccgattcggttgaattccaacggaatcacggcttatatc
agcatcatgcgcgggtgtgataacatgtgcagtttttgtgtggttccgtatacccggggc
cgcgagcgaagccgcgatccgttcagtattgtggaagaggcgcgtttgctttttgccgat
ggatacaaagaggtgacactccttggacagaatgtggacagctataagtggaagaaggaa
acagccaaagacggagaatctacagccaatgcccttccggtcagctttgcacagctgctg
gaaatggtcgcgctgattcaccccgacctgcgcgtccgattcagtacttcgcatcccaaa
gatatcacggatgatgtactttggaccatgaaaaagtacgagaacatctgcaaatacatt
cattttcccgcccaaagcggcaacagtcgcgtattgaaggtcatgaatcgtacctacgac
cgtgagtggtacattcaaaaaattgaccgcatccgggaggtattgggggaagattgcggc
atttcaaccgacatgatcacgggattctgcaccgaaaccgaagaggagcaccaagatacg
ctttcgttgatggagtacgtaaagtatgactatgcatacatgtttgcgtattcggagcgg
cccggtacgccggcggcaaaaaagctaaaggatgatgttccggaagaggtgaaaaaacgc
cgtttgcaggaagtgatcgccgttcagctgaaacattcgagtgagcgcaataaactggcg
ttgggaaaagtccataaagtattggtggaaggcccatccaaacgttctgaggccgatctg
tgcggacgcaatgaccaaaataaagtggtaatcttcccgcgtgaacattataaaaaaggt
gattatgtttatgtattggtaactgactgctcttcggcgaccctgcttggaaaagcggtg
gaagaagtaactgcctga
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