Runella slithyformis: Runsl_4550
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Entry
Runsl_4550 CDS
T01553
Name
(GenBank) LL-diaminopimelate aminotransferase
KO
K10206
LL-diaminopimelate aminotransferase [EC:
2.6.1.83
]
Organism
rsi
Runella slithyformis
Pathway
rsi00300
Lysine biosynthesis
rsi01100
Metabolic pathways
rsi01110
Biosynthesis of secondary metabolites
rsi01230
Biosynthesis of amino acids
Module
rsi_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rsi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Runsl_4550
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rsi01007
]
Runsl_4550
Enzymes [BR:
rsi01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.83 LL-diaminopimelate aminotransferase
Runsl_4550
Amino acid related enzymes [BR:
rsi01007
]
Aminotransferase (transaminase)
Class I
Runsl_4550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Aminotran_5
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AEI50871
UniProt:
A0A7U3ZPA1
LinkDB
All DBs
Position
complement(5251942..5253096)
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AA seq
384 aa
AA seq
DB search
MIISLAQRATQAQEYYFSVKLAEVRKLMAAGHDVINMGIGNPDQSPSEATIAALSHSASQ
ANSHGYQAYKGIPGFRQSIVQWYKRVYGVSLDPETEILPLIGSKEGITHISLTFLDADDE
VLVPELGYPAYRAVSQMVGANVVEYPLLEDQGWQPDWEAMQSLVNSKTKLLWLNYPHMPT
GAPATRELFENAVQFAKKHKILLCHDNPYSLILNQKPPISLLSVEGAKEVAIELNSMSKS
HNMAGWRVGWMSGAKAYIDAVLTIKSNVDSGMFLGIQQAAVAALQNTDQWHQAQNDIYRS
RLDAAKAFLKALHCTYDESQEGMFLWAKLPENVLSAEQLVDELLYQKYIFIAPGFIFGPK
GQRYIRLSLCMPAERIWQAVQRLG
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgattatttcactcgcccaacgcgccacccaagcgcaggaatactatttctccgttaaa
cttgccgaagtacgtaaactcatggccgccggccacgatgtcattaatatgggcatcggt
aatcctgatcaatccccttcagaagctaccattgcagcgctatcacattccgcttcccaa
gccaacagtcacggatatcaggcctataaaggaattcctggctttcgacagagcatcgtt
caatggtataagagggtctatggcgtttcgcttgaccctgaaaccgaaattttgccgttg
atcggttccaaagaaggcattacacacatcagcctgacatttttggacgccgacgatgag
gtactggtgcctgaactcggctatcctgcgtaccgggcagtaagtcagatggtgggagcc
aatgtagtggaatatcccctgctcgaagatcagggttggcaaccggactgggaggccatg
caatcgctggtcaattccaaaacaaaactcttgtggctgaattatccacacatgccaacg
ggagcccctgctacacgtgagctttttgaaaatgcggttcaatttgccaaaaaacacaaa
atattactctgtcatgacaacccatacagcctgattctcaatcaaaagcctcccatcagc
cttctttccgttgaaggagccaaagaagtggccattgagctcaattccatgtctaaatcc
cacaacatggcaggctggcgggtaggttggatgtcgggcgcgaaggcctatattgacgca
gttctgaccataaaaagcaacgtagactcggggatgtttctgggaattcagcaagctgcc
gtggctgcccttcaaaataccgatcaatggcatcaggctcagaatgatatttaccgcagt
cggctggatgcggccaaagcctttttaaaggcactgcactgcacctacgacgaaagtcag
gaaggaatgtttttatgggccaaactacccgaaaacgtactttccgccgaacaattggtc
gatgagttgctgtatcaaaaatacatttttattgcccccgggtttattttcggcccgaaa
ggccaacgttatatccgtttatcgctgtgcatgccggccgagcgaatttggcaagccgtt
caacgactcggttaa
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