Runella slithyformis: Runsl_4610
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Entry
Runsl_4610 CDS
T01553
Name
(GenBank) A/G-specific adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
rsi
Runella slithyformis
Pathway
rsi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rsi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Runsl_4610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsi03400
]
Runsl_4610
Enzymes [BR:
rsi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
Runsl_4610
DNA repair and recombination proteins [BR:
rsi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Runsl_4610
Prokaryotic type
Runsl_4610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
NUDIX_4
HHH
HHH_5
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
AEI50930
UniProt:
A0A7U3ZPE9
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All DBs
Position
5319021..5320082
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AA seq
353 aa
AA seq
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MNNKFFANQLIKWYEYYHRDLPWRQTRNPYYIWLSEVILQQTRVAQGLPYYERFVNTYPT
VFDLANAAEQEVIRLWQGLGYYSRARNLHQTAKYIAGELNGVFPPNYAGLLRLKGIGPYT
AAAIASFAYDEPVAVVDGNVYRVLARVFGIDKDITGGEGQRQFSKLASELISREHPATYN
QAIMEFGAVHCTPSAPDCLLCPLQQECLAYATGRIHLLPVKDKKTKVRERFFNYFVIVQN
GRIAMRQRTAKDIWHKLYDFYLTETESNVQSIDEFSDNQFLTSIFSQTILTPPSRIFTYI
LSHQRIQAQFWMLEASPETVLNLPSDLTFFNEDEIENVPKPVLITSYWKEHFF
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
ttgaataacaagttttttgccaatcaactcattaaatggtacgagtattatcatcgagat
ttaccctggagacagacccgaaacccgtactatatctggctctcggaagtgattctccag
caaacgcgcgttgcgcagggattaccctactatgaacggtttgttaatacctatcctacg
gtttttgatttggctaatgctgctgagcaggaggtgattcgtttatggcagggtttgggt
tattactcgcgcgcgcgaaacttgcatcaaacggcaaagtacattgcgggggagttgaac
ggagtatttcctcccaactatgccggattgcttcgtcttaaaggaatcggcccttatacg
gccgctgccattgcttcttttgcttatgatgagcccgtagcggttgtagacggaaacgta
tatcgagtattggcaagggtattcggcattgataaagacatcaccggcggagagggtcaa
cgtcaattttccaagttggcctctgaactcatttcccgcgaacatccggcaacctataat
caggccattatggagtttggagccgtacattgcacaccctcagcccctgattgtctccta
tgtcccctccaacaggaatgcttggcttatgccaccgggcgtattcatttactgcctgta
aaggacaaaaaaaccaaggttcgggaacgcttttttaattattttgtcattgtccaaaac
gggcggattgccatgcgtcaacgtaccgctaaagacatatggcacaagttatatgacttt
tatctaaccgagacagagtcaaacgttcaatctattgatgaattctctgataatcaattt
cttacgtctattttttcacaaacaatacttacccctccgagccgaatttttacgtatatc
ttatctcatcaacgcattcaggcacagttttggatgctggaagcctcccccgaaactgtg
ctgaatttgccatccgatttaacttttttcaatgaagatgaaatagaaaatgtccccaaa
cccgtattgattacgtcttattggaaagagcattttttttga
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