Runella slithyformis: Runsl_4670
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Entry
Runsl_4670 CDS
T01553
Name
(GenBank) TonB-dependent receptor
KO
K16092
vitamin B12 transporter
Organism
rsi
Runella slithyformis
Brite
KEGG Orthology (KO) [BR:
rsi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rsi02000
]
Runsl_4670
Transporters [BR:
rsi02000
]
Other transporters
Pores ion channels [TC:
1
]
Runsl_4670
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
AEI50989
UniProt:
A0A7U3ZPI4
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All DBs
Position
5386454..5388412
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AA seq
652 aa
AA seq
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MHKLPRFVNETTFVLWLATAPWLYAQKEQSLCEVTVRGVRPERFMVGQKVQEIDSVQLSR
FRYSTLADFLQFQSSAAFKSYGAGQATSIAFRGTSANHTAVLWNGININFPSLGQTDFST
IPLAGFDQMSVQYGSAASCVGTDAVGGSIQLRSVPDFKQKGIQTLMAFRIESSQNYTGQA
GVRFHQTLGKHWNLSGKTLLYGSIFNNDFGTAPRSTRKSERYSFEPARTAQKGVVQDLYW
QHQKGNLISLNLWLTDNTLTLQPKQVPLREITRTQAYRVLGSYQLGKTLIRTGFLRDIID
YGKGENLNPSHTEIDRFILRTEHDFSWIQSCDQGTNLKIGAELVHYNARVDGYGDEVKRE
NRADFYALLRHQFNGRLSASLNLRQALVTRFNPPFTPSLGAEYTLLTRLRTKLIFNGNTS
LSYRVPTLNERYWVNLGNPDLRPERGFNKELGLTWKQRLSETHQFQLSATAFHNLIDDWT
YWNPERNYRVENIQQVLTKGLEMAASIKILRHKTQWEANLNYGLTNASQQKIYGAYTQDF
IGKQLIYVPRHTFGGTLTATRGKASLTVQQQFNSERYSTFDHSGRPFAPYYLLNAVLNYQ
WQKGRFRSDVSLQGNNLTHTVYPNLKKNAMPLRTVSINVILYFQSKQLPNES
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgcacaaactgccgcggtttgtcaatgagacgactttcgtgctgtggctcgccaccgcg
ccctggctgtacgcacaaaaagagcaaagtctctgcgaagtgaccgtacggggtgtacgg
cccgaacgctttatggtcggacaaaaagtacaggagatcgactcggtccaattgtcccgt
tttcgctacagcaccctggccgattttctgcaattccaaagttcggcggctttcaagagc
tacggtgccggacaggccacgagtattgcctttcggggcacttcagccaaccatacggcc
gtgctttggaacggtatcaacatcaatttcccctcgttgggacaaacggatttttcgacc
atcccgctggcgggctttgatcagatgagcgtgcaatacggctctgccgcaagctgcgtg
ggcaccgatgccgtagggggaagtattcaactgcgttcagtccccgatttcaaacaaaaa
ggaattcaaaccctaatggcctttcgaatcgaaagctcccaaaactatacgggacaggcg
ggcgttcgatttcaccaaaccctcggcaagcattggaacctttccggaaaaacactgctg
tacggcagtatctttaacaacgatttcgggaccgccccccgcagcacccgcaaaagtgaa
cgctattcgtttgagccggcccgcacggcccaaaaaggagtggtgcaggatctgtattgg
cagcatcaaaaaggaaatttaatttcgttaaacctctggctgaccgacaataccctcaca
cttcagcccaaacaggtgccgttgcgtgaaatcacccggacgcaggcttaccgcgtgttg
ggctcgtatcagttgggcaaaacgctgatccgaacgggcttcctccgcgacatcattgac
tacggcaaaggagaaaatctgaacccgagccacaccgagatcgaccgtttcatcctgcgc
accgagcatgatttttcgtggatccaaagctgtgatcaaggaacaaatcttaaaataggc
gctgaattggtgcattacaacgcccgggtcgatggctacggcgatgaggtcaaacgagag
aaccgggcagacttctacgccttgctgcggcatcaattcaacggccggctgagtgcctcc
ttaaaccttcggcaagcgttggtgacccgtttcaatcctccctttactccctcgctgggc
gcggagtacaccctgcttacccgattacgtaccaagctgattttcaacggtaatacatcg
ctgagctaccgggttcccacgctcaacgagcgctattgggtcaatctgggaaatccggac
ctccgacccgagcgcggttttaataaagaactgggcctgacctggaaacaacgcctgtcc
gaaacccaccaatttcagctttcagccactgcttttcataacctcattgacgactggacc
tattggaacccggagcgaaattatcgggtcgaaaatatacagcaagtgctgaccaaagga
ctcgaaatggcggcttctatcaaaatacttcggcataaaacgcaatgggaagccaacctg
aactacggcttgacaaatgcttcccaacagaaaatttacggcgcatatacgcaggacttt
atcggcaaacaacttatttacgtgccccgtcatacttttggaggtacgctcacggctacc
cgggggaaggcttccctgacggtgcaacaacagtttaactcagaacgctacagcaccttt
gaccattcggggcggccttttgcgccttattacctgttgaatgccgtcctgaattatcaa
tggcaaaaaggaaggttccgcagtgatgtctcccttcagggcaataaccttacccatacg
gtctatcccaacctgaaaaaaaatgccatgcccctgcgcacggtttccatcaacgtcatt
ctttattttcaatcaaaacaactacccaatgaatcgtaa
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