Runella slithyformis: Runsl_4812
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Entry
Runsl_4812 CDS
T01553
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rsi
Runella slithyformis
Brite
KEGG Orthology (KO) [BR:
rsi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rsi03016
]
Runsl_4812
Enzymes [BR:
rsi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Runsl_4812
Transfer RNA biogenesis [BR:
rsi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Runsl_4812
Prokaryotic type
Runsl_4812
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AEI51125
UniProt:
A0A7U3ZPS7
LinkDB
All DBs
Position
complement(5559059..5559754)
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AA seq
231 aa
AA seq
DB search
MIDDSATSPDEGEVILLNKPLTWTSFDAVNKIKKACRFKKIGHAGTLDPLATGLLILCTG
KKTKEIDTYQGAEKEYTGKMVLGKTTPSIDLETPFDGEYPIDHITPELMQAAVAKLTGEL
SQYPPIYSAVKMGGERLYKKARRGEAVEIKPRSVSVPVFEIDAVHFPEISFRVVCSKGTY
IRSLVRDFGMLLESGAYMSELCRTRIGAYWLKDADEIEEYVKRKREELGLS
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgatagatgactctgcaacttctcctgatgagggagaagtgatcttgcttaataagccc
cttacctggacatcttttgatgccgtcaataaaattaaaaaagcctgtcgttttaaaaaa
atcggtcatgccggaaccctcgaccctttggcgacgggcttgctgattttgtgtacaggt
aagaaaaccaaggaaattgatacctatcagggggcagaaaaagaatataccggcaaaatg
gtgctgggcaagaccactccttccatcgaccttgaaacgccctttgacggcgaatacccc
attgatcatattacgcctgaattgatgcaggctgccgtggcaaaactgacaggcgagctt
tcgcagtatccgcctatttattcggccgtaaaaatgggaggggagcggctctacaaaaag
gcccgtcggggagaggcggttgagatcaaaccccgttcggtttcggtaccggtctttgag
attgatgctgtccattttcccgaaataagttttcgtgttgtttgttcaaaagggacttat
attcgcagtctggtccgtgattttggaatgctgcttgaatcaggggcttatatgagtgag
ctttgtcgtacccgaatcggggcctattggctgaaagacgcggacgaaatagaagagtac
gtaaaaagaaaacgggaagaattaggattaagttaa
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