Runella slithyformis: Runsl_4924
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Entry
Runsl_4924 CDS
T01553
Name
(GenBank) RagB/SusD domain-containing protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
rsi
Runella slithyformis
Brite
KEGG Orthology (KO) [BR:
rsi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rsi02000
]
Runsl_4924
Transporters [BR:
rsi02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Runsl_4924
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
TPR_19
Motif
Other DBs
NCBI-ProteinID:
AEI51234
UniProt:
A0A7U4E8A4
LinkDB
All DBs
Position
complement(5691396..5693168)
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AA seq
590 aa
AA seq
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MKNIVCSIGTWLRKKAPIGGLAALIFFSNSCKEAFLDRQPIGVFSEEALKTRSGINGILV
GAYAGLNGAMYGNGSSAGADVNSFSNWVFGGITSDDAQKGADVGGSRSDIERYEVTPAST
KLDDRWRFCYDGIARCNDVLRLVPEIKGLTDVEIRNLTGQARALRALYYFHGTIIFGRMP
WIDEKTTDYRQPNERVLWKEMEADLQYAYANLAETFPETGRINKWAAGSLLAKILIFQKK
WSEAKSVLDAIVANGRTTKGLKYNLLARYHDNFRIATQGSTIDTEAVLDVNYSANDNSRG
FNGGLGENLNFPHGGLASQPAGCCGYFQPSQDLVNAHRTDPDGMPFLDDYNRFEVKNDQG
IESSQAFVPDAGNLDPRLDHSVGRRGIPYLDWGLHPGKAWVRDQNYAGPFQPKKNVYYKT
DEMSGLVDPDRRTSANNFRLIRYAEVLLMAAETEIELGNLEKGREYVNLIRRRAANPDGF
VKLPDGKPAANYVISEYKTPWTNKETALKAMRFERRLELAMEGQRFFDLVRWGIAKDVLN
KYLAYEVTKRSNLRGAAFKDHNIVFPVPQRQIDATKTAEGTATLSQNPGY
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacatagtttgcagcattggtacttggttgcgtaaaaaagcccctatcgggggt
ttggcggctttgatcttttttagtaattcctgcaaagaagcatttttagaccgtcagcct
ataggtgttttcagtgaagaagccctcaaaacccgttcgggcatcaacggtattttggtg
ggcgcttatgcgggtttgaacggtgcgatgtatggcaacggttcaagtgcgggggccgat
gtcaactcgttttccaattgggtatttggcggaattacctccgatgatgcccagaaaggc
gcagatgtaggtggcagccgctctgacattgaacgctacgaagtaacccccgccagtacc
aaactcgatgaccgttggcgcttctgttatgacggcattgcccgctgcaatgacgtgctg
cgcctggtccccgaaataaaagggttgaccgatgtcgaaatcagaaacctgacggggcaa
gcgcgggcgttgagggcgttgtactattttcatggtacgattatcttcggacgaatgccc
tggatcgatgaaaaaaccactgactaccgccagcccaacgagcgggtattgtggaaggaa
atggaggccgatctgcagtatgcctacgccaatttggccgaaacattccccgaaacaggc
cgcataaacaagtgggcggcgggttcgctgttggcgaaaattttgatttttcagaaaaaa
tggtcggaagcaaaaagcgttttggatgccatagttgccaatgggcgtaccactaaaggt
ttaaaatacaatcttttagcgcgctatcacgacaatttcaggattgcgactcaaggcagt
accattgacacagaagcagtgctggatgtaaactactcggccaatgacaacagtaggggc
tttaacggcggtttgggcgaaaatctaaattttccacacggtggcctggcctcgcaacct
gcgggctgctgcggctattttcaaccttcgcaagatttggtaaatgctcaccgcaccgac
ccggacggtatgccgtttttggatgattacaataggtttgaagttaaaaatgaccagggt
attgaaagttcacaggcttttgtgccggatgcgggcaaccttgacccccgcttggatcat
tccgtcggccggcggggcatcccgtacctggattggggcttacaccccggcaaagcgtgg
gtgcgcgaccaaaactatgcggggccgtttcagcctaagaaaaacgtgtattataaaacc
gacgaaatgagtggtttggtagatcccgaccgccgcacttcggccaataattttcgactt
atacgctatgctgaggtacttctgatggctgctgaaactgaaattgaactgggcaacctt
gaaaaaggccgagagtacgtcaatctcattcgccgccgggctgccaatcctgacggtttt
gtcaagctgcctgatggtaagccggcggccaattatgttatttcggaatataaaaccccc
tggaccaacaaagaaaccgctctcaaagccatgcgttttgaacggcgcttagaattggcc
atggaaggccagcggttttttgatttagtgcgctggggtattgccaaagacgtactgaac
aaatacttggcctacgaagtcaccaaacgctcgaatcttcgcggtgctgcatttaaagac
cacaatatcgtttttcccgtgccgcaacgccaaatagatgcgaccaaaacggccgaagga
accgctacgctaagccaaaatccgggctattag
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