Runella slithyformis: Runsl_5080
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Entry
Runsl_5080 CDS
T01553
Name
(GenBank) transcriptional regulator, AraC family
KO
K13652
AraC family transcriptional regulator
Organism
rsi
Runella slithyformis
Brite
KEGG Orthology (KO) [BR:
rsi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rsi03000
]
Runsl_5080
Transcription factors [BR:
rsi03000
]
Prokaryotic type
Helix-turn-helix
AraC family
Runsl_5080
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GyrI-like
HTH_18
HTH_AraC
Cass2
SPMIP11
TviD_N
Motif
Other DBs
NCBI-ProteinID:
AEI51385
UniProt:
A0A7U3ZQ95
LinkDB
All DBs
Position
5895899..5896768
Genome browser
AA seq
289 aa
AA seq
DB search
MRTDTKNSYLESINKAIAFIESNSATDIQLKDIAIQANLSQYHFHRVFKSLTGDTTKAFL
TRLRLEKAALKLKHSQIEVGQIALDCGYQNHETFTRAFKEYFGLTPIEYRNSIAEKTTDK
QKEYEKANIDLNALNVQGPIIKTIPDLHLSYIRHTGSYDKAGSSFQKLMFWAATHLVLKL
KPVTIGIVHDNPDLTAEQHIRFDACVLVSKEIKPSGEIGYKKIEGGKFAVFTYKGGYEGF
YPVYDYIYNVCLFENKFDLADKPALEWYVKSPPFYKPENFVTDFYLPVK
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgagaacagacaccaaaaattcatatcttgaaagtataaataaggcaattgcattcata
gaaagtaattcggcaactgacattcaactcaaagacattgctatacaggcaaatctttct
caatatcattttcatcgggttttcaaatcactaacaggcgatactacaaaagcctttttg
acacgacttcgacttgaaaaagcggctctaaaacttaagcattcacagatcgaggttgga
caaattgcgttagattgtggttatcaaaatcacgaaactttcacaagagcatttaaagaa
tattttgggctgacaccaatagagtatcgcaactccatagcagaaaaaacgacagataaa
caaaaggaatacgaaaaagcaaacattgacctaaatgcactcaatgttcaaggtccgata
atcaaaacaattccagaccttcatctttcgtacatcaggcacacgggttcgtatgataag
gcaggcagttcctttcaaaagttaatgttttgggctgcaacacatttagttttgaaatta
aaaccagtaacgattggtattgtacacgacaatcccgatctgacagcagaacaacacatt
cgttttgacgcttgtgttttagtttccaaagaaataaaaccaagcggagaaattggttac
aagaaaattgaaggaggcaagtttgcggtgtttacttataaaggaggttacgaaggattt
tatcccgtttacgactacatttataacgtttgcttgttcgagaataaatttgacttagcc
gacaagcctgcacttgaatggtatgttaaatcgccaccattctataaacccgaaaatttt
gtaactgatttctaccttccggtaaaatag
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integrated database retrieval system
