Runella slithyformis: Runsl_5128
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Entry
Runsl_5128 CDS
T01553
Name
(GenBank) pseudouridine synthase Rsu
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
rsi
Runella slithyformis
Brite
KEGG Orthology (KO) [BR:
rsi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rsi03009
]
Runsl_5128
Enzymes [BR:
rsi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
Runsl_5128
Ribosome biogenesis [BR:
rsi03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Runsl_5128
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
AEI51430
UniProt:
A0A7U3ZQB9
LinkDB
All DBs
Position
5967961..5969556
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AA seq
531 aa
AA seq
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MKKDRKTPGSAPFYNKYKKDSPASSDKSFDKKGPRDRSERSFDKPFDPKRTGDKPAFKKP
FDKPFERKGDFKPRGERSFDKPFEKRGDRPERGERPAFKKPYDKPFESKGDFKPRGEKNF
NKPFEKRADGADRPYDREKRSFDKPFEKRGEKSFDKPFERRPRQNDKPYDREKRTFDKPF
ERRDDRSERPYDREKRNSDKSFERRDDRPERSERPAFKKPFEKTERDTSRSFDREQHPFD
KPKRPRTVDKPNINDRRDRARDAELRRVGEFKEAPRYDFTRAEERYTKKIQAKNDDGQIR
LNKYIANAGLCSRREADGLIESGQITINGKVVTEMGHQVNPGEVVKYGNRVLNPEKMVYI
LINKPKDYITTTDDPEGRHTVMELIAGACKERVYPVGRLDRNTTGLLLLTNDGELAEKLM
HPSNEIQKIYQVELDKPITPEDFEKIKAGFDLEDGPIKPDDLAIVTPDAMVVGIEIHSGR
NRIVRRIFESLGYEVLKLDRTVYGGLTKKELPRGKWRFLNEKEVIKMRYKL
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagacagaaaaacaccgggcagcgcgcctttttacaacaagtacaaaaaggat
tcgccggcgtcgtcagacaagtcatttgacaaaaaaggcccccgtgacagaagcgaaagg
tcttttgataagccttttgatccaaaacgtaccggcgacaaacccgccttcaaaaagccc
tttgataaaccctttgagcgaaagggcgacttcaaacctcgcggcgaaagaagcttcgac
aaaccttttgaaaaacgtggtgaccgccccgagcgcggcgaacgccctgccttcaaaaaa
ccctacgacaagccgtttgaaagcaagggcgacttcaaacctcgtggcgaaaaaaacttc
aacaaaccttttgaaaaacgcgccgacggagcagatagaccgtacgaccgcgaaaagcgc
agcttcgacaaaccctttgaaaaacgcggcgaaaaaagctttgataaaccgtttgaaaga
cgtccgagacagaatgacaagccttacgaccgcgaaaaacgtaccttcgataaacccttt
gaaagacgggatgaccgcagcgaaagaccttacgaccgtgaaaagcggaattctgataag
tcctttgaaagacgggatgaccgtcctgaacgcagcgaacggcccgctttcaaaaagccg
tttgaaaaaacagaacgtgatacctcccgttcttttgatcgggaacaacatccctttgat
aagccgaaacgcccgcgcaccgttgacaaaccaaatatcaacgaccgccgcgaccgggca
cgtgatgccgagctgcgccgggtaggagaatttaaggaagctccccgctatgatttcacc
cgggctgaagagcgctatacaaagaaaatacaggctaaaaatgacgatgggcaaattcga
ctcaacaaatacattgccaacgccgggctttgctcgcgccgtgaagccgatggactgatc
gagtcgggacaaatcacgatcaacggaaaagtagtcacggagatgggacatcaggtcaat
ccgggggaagtagtcaaatacggcaaccgcgtgttgaaccccgaaaaaatggtgtatatc
ctcatcaacaaacctaaagattatatcactaccaccgacgacccggaaggacgtcatacc
gtcatggaactgattgccggcgcgtgcaaagagcgcgtgtatccggtagggcgtctggac
cggaatacaacgggtcttttactcctgaccaacgacggtgaattggccgaaaagctgatg
cacccttccaacgaaattcaaaagatctatcaggtagaactggacaagcccattacgccc
gaagactttgagaaaatcaaagcaggttttgatttggaagatggccccatcaaacccgat
gacctggccattgttacacctgatgccatggtagtgggaattgagatccacagcggacgc
aaccgtatcgtacgccgtatttttgaaagtttgggctatgaagtcctgaaacttgaccgt
accgtgtacggcggtctgaccaaaaaagagcttccgcgcggtaaatggcgcttcttaaat
gaaaaagaagtgatcaaaatgaggtataaattatag
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