Runella slithyformis: Runsl_5156
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Entry
Runsl_5156 CDS
T01553
Name
(GenBank) Hydroxymethylglutaryl-CoA lyase
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
rsi
Runella slithyformis
Pathway
rsi00280
Valine, leucine and isoleucine degradation
rsi00650
Butanoate metabolism
rsi00907
Pinene, camphor and geraniol degradation
rsi01100
Metabolic pathways
rsi01120
Microbial metabolism in diverse environments
rsi04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
rsi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
Runsl_5156
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Runsl_5156
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
Runsl_5156
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Runsl_5156
Enzymes [BR:
rsi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
Runsl_5156
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Gene cluster
GFIT
Motif
Pfam:
HMGL-like
DUF4434
Motif
Other DBs
NCBI-ProteinID:
AEI51456
UniProt:
A0A7U3ZQD2
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All DBs
Position
complement(5994883..5995728)
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AA seq
281 aa
AA seq
DB search
MKLIECPRDAMQGLADFVPTETKVDYLNRLLQVGFDTLDFGSFVSPKAIPQMRDTAEVVK
KMDMSATKTKLLAIVANVRGAQEAAAFEQITYLGFPLSLSETFQLKNTNKTIEQAFGEVS
EIQNECLAADKQLVVYLSMGFGNPYGDPYSPELVEQFSERLTEMGVHIIAPSDTIGSSTT
DAIKTLYGHLLKRFPNVEFGAHLHAKSSHTAKKVRAAYKTGVRRIDCAVRGFGGCPLAED
KLVGNLATELVVSELNQLEAKLTIDELQLAQAMLASQYVFG
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
ttgaaactcattgaatgtccacgggatgccatgcaggggctggccgattttgttcccacg
gaaacaaaagtcgattatttaaatcgcctgttacaggtaggttttgacacgctggatttt
ggcagctttgtgtcgcccaaggccattccgcagatgcgcgatacggccgaggtcgtgaaa
aaaatggatatgtccgctaccaaaaccaaactgctggccatcgtggccaatgtacgaggc
gcacaggaagcggccgcatttgaacagattacgtatttaggttttccgttgtctctttct
gagacctttcaactcaaaaataccaacaagaccattgagcaggcgtttggagaagtaagt
gaaattcaaaacgagtgcctggctgccgataagcaattggtcgtttacctttcgatgggt
ttcggaaatccgtacggtgatccgtacagccctgaactggtggaacagttttcggaacgc
ctgacagaaatgggagttcacatcattgctccgtctgataccattggaagcagcacgacc
gacgccatcaaaacattgtacgggcatctgctcaaaagattcccaaacgtagaattcggc
gcgcaccttcatgccaagtcaagccatactgccaagaaagtacgagcagcttacaaaacg
ggggtccggcgcattgattgtgccgtccggggttttggcggctgtccgctggcagaggat
aaattggtgggtaatctggcgactgagctggtcgtgagtgaattgaatcagttggaagcg
aaactgaccattgatgagctgcaactggcgcaggctatgctggcgtcgcagtatgtattt
gggtaa
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