Runella slithyformis: Runsl_5255
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Entry
Runsl_5255 CDS
T01553
Name
(GenBank) ABC transporter related protein
KO
K06158
ATP-binding cassette, subfamily F, member 3
Organism
rsi
Runella slithyformis
Brite
KEGG Orthology (KO) [BR:
rsi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
rsi03012
]
Runsl_5255
Translation factors [BR:
rsi03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
Runsl_5255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
ABC_tran_CTD
AAA_21
SMC_N
AAA_29
AAA_22
AAA_15
MMR_HSR1
NPHP3_N
NACHT
AAA_28
MTR4-like_stalk
RsgA_GTPase
MYO10_CC
Allexi_40kDa
DUF2443
Motif
Other DBs
NCBI-ProteinID:
AEI51554
UniProt:
A0A7U4E8S0
LinkDB
All DBs
Position
complement(6108905..6110845)
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AA seq
646 aa
AA seq
DB search
MISITNLSYYLGDRALYENASLHIKPKDKIGLIGLNGTGKSTLLHLIVGNYQPDAGHISK
SGGCTIGFLNQDLLSYQSDDSILSVAMQAFERANELQRQMDAVIHEMEVNYQDKLVDRLA
RIQEEFEALDGYSIQSKAEEILEGLGFSTADLQKPLRLFSGGWRMRVMLAKLLLQKPSLL
MLDEPTNHLDLPSIQWVEKYVQSYENAVIVVSHDREFLDNVCDTMVEVSNQKLNYYGGNY
SFYIEEKALRNEIQKGAYENQQAKIRQTERFIERFKAKATKAKQAQSRAKMLDRMDRVEA
VVDENAKVHFRFQFTTQPGRHVLQLENVSKAYGEKEILRNTGIAMERGDKIALIGANGKG
KSTLLRVIAGTEPIEGERRLGHNVLFTFYAQHQLESLNIEHTILEELKYANPTKSETECR
TILGCFLFTGEDVFKKIKVLSGGEKSRVALAKVLVSEANFLLLDEPTNHLDMQSVNILIQ
ALRQYEGSFVVVSHDRFFVEAIANKIWYIDNREVKEYPGTYQEYEWWQEERGEEENAKGK
EAVMTSLASMNAIKTAPAVAPAPTKNGNSNNQALKQLQNKVNQLEKEIDALEKQKAEIES
TLADEAIYSNPDKLTEVNRQYADIKQKIDKATEDWEQAVLEADALA
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgatttcaataactaacttatcgtattacctcggcgaccgagcgttgtatgaaaacgcc
tcgcttcacatcaagcctaaagacaaaatcggccttatcgggctgaacggaacgggcaag
tcgacgttgttgcacttaattgtaggaaattatcaacccgatgccgggcatatctcaaaa
tcaggcggttgtacgatcggatttttgaatcaggatctgctttcctatcaaagcgacgac
tctattttgtcggtagcgatgcaggcctttgagcgcgccaacgaactgcaacggcagatg
gacgcggtcattcatgaaatggaagtaaattatcaggacaaactcgtggatcgtcttgcc
cgtattcaggaagagtttgaagccttggatggctattccatacagtcaaaagcagaagag
attctggaagggctcggtttttcgacggctgatctgcaaaaaccactacggcttttttcc
ggagggtggcgtatgcgggtgatgctggcgaaattgctgctgcaaaaaccctcacttctg
atgctcgatgagccgaccaaccacttggaccttccttcgattcagtgggtggaaaaatac
gttcagagttatgaaaatgccgtgatcgtggtttctcacgaccgtgaatttttggataat
gtctgcgatacaatggtggaagtgagtaaccaaaaactgaattattacggcggcaattat
tccttttacatcgaagaaaaagccctgcgtaacgaaattcaaaaaggcgcttacgaaaac
caacaggctaaaattcggcaaacggagcgttttattgagcgctttaaagcgaaggctacc
aaggccaagcaggcccagagccgcgccaaaatgctggatagaatggaccgcgtggaagcc
gtcgtggatgaaaacgccaaagtccattttcgatttcagttcaccacccaaccggggcgt
catgtactccagcttgaaaatgtatcaaaagcctacggagagaaagaaatcctgcgcaat
accggcattgccatggagcgtggggataagatcgccctcatcggggccaacggaaaagga
aaatcgacgcttctgcgggtgatcgcaggcaccgaacccattgaaggcgagcggcgttta
ggacataatgtgctgtttacgttttatgcccagcatcagttggagtcgttgaacatcgaa
catacgattctggaagagttgaaatatgccaacccgaccaaaagtgaaaccgaatgccgt
accattttgggatgctttctgtttacgggcgaggatgtatttaaaaagataaaggtactt
tcgggaggagaaaaatcgcgcgtggcgttggctaaagtgttggtgtcggaggcgaacttt
ttattgcttgatgagcctaccaaccacttagacatgcaatcggtcaatatcctgattcag
gcgttgcgccaatacgaggggtcgtttgtagtggtatcgcacgaccgcttctttgtggaa
gccattgcgaataaaatttggtatatcgacaaccgcgaagtgaaagaataccccggcacg
taccaggaatacgaatggtggcaggaagaacggggagaggaagaaaatgccaaaggcaaa
gaagccgtcatgacgagtttagcctccatgaatgcgatcaaaaccgccccggccgttgcc
cccgccccaacgaagaatggaaactcgaacaaccaggcactgaagcagcttcagaataaa
gtcaatcaacttgaaaaggagatcgacgccctggaaaagcagaaagcagagatagaaagt
acgttggcggatgaagctatctacagcaatccggacaagttgacggaggtcaaccgtcaa
tacgctgacatcaagcaaaaaatagataaagcaacggaagactgggaacaggccgtactc
gaagccgatgcgttggcgtag
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