KEGG   Runella slithyformis: Runsl_5274
Entry
Runsl_5274        CDS       T01553                                 
Name
(GenBank) type I site-specific deoxyribonuclease, HsdR family
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
rsi  Runella slithyformis
Brite
KEGG Orthology (KO) [BR:rsi00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:rsi02048]
    Runsl_5274
Enzymes [BR:rsi01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     Runsl_5274
Prokaryotic defense system [BR:rsi02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   Runsl_5274
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N ResIII T1R_D3-like DEAD SNF2-rel_dom SLFN-g3_helicase CTD11
Other DBs
NCBI-ProteinID: AEI51573
UniProt: A0A7U4E8C8
LinkDB
Position
6130702..6133779
AA seq 1025 aa
MGNLSELNGAEKPVTEWLSKMGWTFKSQKDLKVYERPFSKPIIEQLLIEKTAAINGISQD
IARRAVELLLHNLNNPVPILGNEAFLEKLVSGVTLAVKDRDMDVHFIDFEDIWQNDFIVT
NQYWVQGYKMVKTDIILLVNGIPLVPIEAKQRAKKGVNWMEGVRQFSTYDQRADKLFMCH
AFGVACNGRVAKYGIPGASSSYFNEWKDTILDLSHPNPILDPTNDLCPTYQDPKDGLWNF
DVARLPNGEVLERMKLGIIGLLQPARVLDILQHFLVFERAEGKIIKKVARYQQLRAANKI
AARVIKGDLNQGVIWHTQGSGKSLTMLYTAYKLRQSKALKDPTIYIVVDRKDLREQIGGT
FDDCEFPNARAVNNMGDLKHIIKTAPSGVFITTVQKFDELGDRQDLRDNVIVLIDEAHRS
QYGTFQMELQAVLPNAKRFAFTGTPIPKTHQEFGLIAAEHQEKYGKTHERYLDRYSIQDA
IDDGATKPIRYTFGPIEWFLDKEKLKQGYEEITAELTEDEKRAVERRVSAWKVFLKHPER
VETLAKDIATDFREMLEPQGYKAQIVACDKEACVLYYNELLKYFDRSEMAIIFSTGHNEE
GEKYELYKDHYKEDAERKRLIRQFKRRITEEEQKMGNNLKIFIVCNMLLTGFDAPIEQTM
YLDSPLRDHNLLQAVARTNRPYDDKVTKLSKEFGRIVDYVGVFQNYKEALNYDPEDIGEF
EDVESLVKTFPKVLDDAFEPFESITLEDSYDCTMAIVRKLSEIDHGKFENNFREVVQLWE
SISPHPALRASKIKYLWLNEIYEIYLEEFKRLDFDAEIYAAKTRKLIEESTQLLDFKGHL
PEILIDSDYLNKLKEIKLDPSDKAEKIIRDIETVIRKNEVNSAIYVEFQNRLDELIKQKK
AESLAIEEILNQLGVLYTELDEVASLPTRMGFPDKGSFEFYTLIKNGSGVDFNEALARAF
SLEAAEKIKAKVYGGWQEVPREFDRLKYEILLLSVNPRFEELKIDSNDELVEQIMKAVLQ
NYRLN
NT seq 3078 nt   +upstreamnt  +downstreamnt
atgggtaatttatcagaactcaacggtgcagaaaaacccgtaaccgaatggctcagcaaa
atgggctggacgttcaagagccaaaaagacctaaaagtctatgaacgccctttctccaaa
cccatcattgagcaactactcattgagaaaaccgctgccatcaacggcataagccaagac
attgcccggcgtgcagtagaattgttgttgcacaatctgaacaaccctgttcccattctc
ggcaacgaagcctttttagagaaattggtgtcgggcgttacgctcgccgtcaaagaccga
gacatggatgtgcattttatagattttgaggatatttggcagaatgattttatcgtcacc
aaccaatattgggtacagggctacaaaatggtgaaaaccgatattatattattggtcaat
ggcattcccttagtacctattgaagccaaacagcgagccaaaaagggcgtaaactggatg
gaaggcgttcggcagttttctacctacgaccagcgtgccgacaaactctttatgtgtcac
gcttttggcgtggcctgcaatggccgagtagccaaatacggcattccgggagcgtcttcg
tcgtatttcaacgagtggaaagacaccattctggacctaagccatcccaaccccatcctc
gaccccaccaacgacctctgccccacctaccaagaccccaaagacgggctttggaatttt
gacgtagcccgcctgcccaacggcgaagtattggaacgaatgaagctcggcatcattggc
ctgctgcaacccgcacgggtattggatattttgcagcatttcttggtttttgagcgagca
gagggcaaaatcatcaaaaaagtggcccgttatcagcaattaagggccgccaacaaaata
gccgcgcgagtcatcaaaggcgacctaaaccaaggcgtgatttggcatacccaaggctcg
ggcaagagtttgaccatgctctataccgcttacaaattgcgccaaagcaaagcactcaaa
gaccccaccatttacatcgtcgtggaccgcaaagacctgcgggagcaaataggcggcaca
tttgacgattgcgagtttcccaacgcccgagccgtcaacaacatgggcgatttgaaacac
atcatcaaaaccgccccttcgggcgtgttcatcaccaccgttcagaagtttgatgaattg
ggcgaccgtcaggatttacgggataatgtcatcgtgctgatagacgaagcccaccgcagc
caatacggtacgtttcagatggaactgcaagccgtattgcccaatgccaagcgttttgct
tttacgggtacgcccattcccaaaacccaccaagagtttggattgatagccgcagaacat
caggaaaaatatggcaagacgcacgaacgttatttggaccgatacagcattcaggatgcc
attgacgacggcgctaccaagcccattcgctacacgtttggacctattgagtggtttttg
gacaaagagaagctaaaacaaggctacgaagaaatcaccgccgaactcaccgaagacgaa
aaacgagccgttgaaaggcgggtttcggcttggaaagtatttttaaaacaccctgagcga
gtagaaacccttgccaaagatattgcgactgatttcagggaaatgctcgaaccacaaggt
tacaaagcccaaattgtagcttgcgacaaagaagcctgcgtgctgtattacaacgagtta
ttgaagtattttgaccgctcagaaatggcgattattttctcaacgggccataacgaagaa
ggcgagaaatacgaactttacaaagaccattacaaagaagatgccgaacgcaaacggctc
atcaggcagtttaagcgaagaatcaccgaagaagagcaaaaaatggggaataacctcaaa
atcttcattgtctgcaatatgctgttgacgggttttgatgcacccattgagcaaaccatg
tatttggacagtcctttgcgtgaccacaacctgctgcaagccgtagcccgtaccaaccgc
ccctacgacgacaaagtaaccaagctctccaaagaatttgggcgaattgtagattacgtg
ggcgtattccaaaactacaaagaagccctcaactacgaccccgaagacattggcgaattt
gaagatgtagaaagtttggtcaagacctttccaaaagtgctggacgacgcatttgagccg
tttgagtctattaccttggaagacagttacgattgtacaatggccatcgtgcggaaactt
tcagaaatagaccacggcaagtttgagaataattttagagaagtggtacaactatgggaa
tctatctcaccacatcctgcccttcgagcatcgaagataaaatacctgtggctcaatgaa
atttacgaaatctatctggaagaattcaagcgcttggattttgatgccgaaatctacgcc
gccaaaacccgaaaactcattgaagagagcacccaactacttgattttaaggggcatcta
cccgagattttgattgattcggattatctcaacaagctaaaagaaatcaaactcgaccct
tcggacaaagccgagaaaatcattcgggatatagaaacggtcattcgtaaaaacgaagta
aacagtgccatttatgtggagtttcaaaaccgcttagatgagttgataaaacagaaaaaa
gcagaaagtttggcgattgaagaaatactgaatcagttgggggtgctttataccgaattg
gacgaagtggcttcattgcctacacgaatgggcttccccgacaaaggcagttttgagttt
tatacacttatcaaaaatgggtcgggggtagatttcaacgaagcattggcgagagcgttt
tcactggaagcagccgaaaaaatcaaagccaaggtttacggcggttggcaagaagtaccc
cgagagtttgaccgtttgaaatacgagattttgcttttgtcggtcaatccgaggtttgaa
gaattgaaaattgacagcaacgatgaattggtagagcaaatcatgaaagctgttttacag
aattaccgattgaattga

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