Runella slithyformis: Runsl_5401
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Entry
Runsl_5401 CDS
T01553
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
rsi
Runella slithyformis
Pathway
rsi03030
DNA replication
rsi03430
Mismatch repair
rsi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rsi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Runsl_5401
03430 Mismatch repair
Runsl_5401
03440 Homologous recombination
Runsl_5401
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rsi03032
]
Runsl_5401
03400 DNA repair and recombination proteins [BR:
rsi03400
]
Runsl_5401
Enzymes [BR:
rsi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Runsl_5401
DNA replication proteins [BR:
rsi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Runsl_5401
DNA repair and recombination proteins [BR:
rsi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Runsl_5401
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
DNA_pol3_gamma3
AAA_5
RuvB_N
AAA_22
RCF1-5-like_lid
DNA_pol3_delta_C
AAA_30
AAA_14
Rad17
AAA_18
Matrilin_ccoil
AAA_assoc_2
AAA_2
AAA_19
Mg_chelatase
AAA_7
RNA_helicase
VapE-like_dom
AAA_lid_RFC1
AAA_16
AAA_24
nSTAND3
AAA_33
Motif
Other DBs
NCBI-ProteinID:
AEI51692
UniProt:
A0A7U3ZQU9
LinkDB
All DBs
Position
complement(6268400..6270205)
Genome browser
AA seq
601 aa
AA seq
DB search
MADNFVVSARKYRPVTFDTVVGQSHITTTLKNAIRTNHLAQAFLFCGPRGVGKTTNARIL
AKTINCQSLTDEVEPCGECESCVAFQNNASFNVHELDAASNNSVDDIRNLIDQVRYPPQT
GKYKIYIIDEVHMLSSAAFNAFLKTLEEPPSYAIFILATTEKHKILPTILSRCQIFDFNR
IQPRDIADHIEQIARKEGIQTEREALELIAQKADGGLRDALSMFDLNVTFSTDNTVRYKE
VLENLHILDYDYYFRLTDALLAGNLSETLLTFNEVLKKGFDGHLFVIGMLEHFRNLLVSK
DSATVQLLEVSETAKNKYLDQSTRASLSFLLSALSVGGQCDINYKASKQQRLHVELCLMK
MAKLTEVLDLEALAADEKKKPSVGAGPGGAPLASAQSNAASGQNGSSQNMQGDRNGTPHA
PVPTTAEPTVTYQNAPNGKGLSLGKLRSTVNLSTSVIDSPEPTQVSKPVEVVLDTLPEKD
LPVTVEALKEAWAEFSRMRQQNGGAVSEQIMLNRDFTFEDMTIELVLDNGHQETLLNEVK
PTLLGYLRRALQNRQLQIVHRIAQDDGKRKAYTPQEKFNVLAERNPALFDLQRLLGLEVD
F
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaattttgtagtatcggctcggaaatatcgcccggttacgtttgatacggtg
gtcgggcagtcgcacattaccactaccctcaaaaatgcgattcggaccaatcacctggcg
caggcattccttttttgcggcccccgcggggtgggaaaaacgaccaatgcgcgtatttta
gccaaaaccattaattgccaaagccttactgatgaagtagaaccctgcggagagtgcgaa
tcgtgcgtggcgtttcaaaataatgcctccttcaacgtgcatgaattggatgcggcctcc
aacaactccgtcgatgatattcgtaacctgattgatcaggtaaggtatccgccccaaacg
ggaaaatacaaaatatacatcattgacgaggtacacatgctgtcttcggcggcgttcaat
gcttttctgaaaaccctcgaagagccgcccagctatgccatttttattctggccacgacc
gaaaaacacaagatcttaccgacgatcctgtcgcggtgtcagattttcgattttaatcgg
attcagccgcgcgatatcgccgatcatattgagcagattgctcgaaaggaaggtatccaa
accgagcgtgaagccctcgaactcattgcccaaaaagccgacggcggacttcgtgatgca
ctttcgatgtttgacctcaacgttactttctcgaccgacaataccgtgcggtataaagag
gtactcgaaaaccttcatattctggattacgattattatttccgcctgaccgatgcactt
ttggcgggaaatctttccgaaaccctgttgacgtttaacgaggtactgaaaaaagggttt
gacgggcatttgtttgtgatcggtatgttggagcattttcgtaacctgctggtttccaaa
gattctgccacggtccagttgctggaagtttccgagactgcaaaaaataagtacctcgac
caatcaacacgggcgtcgctgtccttcttattgtcggcgctgagcgttggcgggcagtgc
gacattaactacaaggcgtccaagcaacagcgcctgcacgtggagctgtgcctgatgaag
atggccaagctgactgaggtgctggacctggaagccctcgcggccgacgaaaaaaaaaag
cctagcgtaggggcaggtccgggcggcgctccgcttgcgtctgcccaatcaaacgctgct
tccggccaaaacggttcttcgcaaaacatgcagggagatcgaaacggtacgccgcacgcc
cccgtccccacgactgcggaacctaccgttacctatcaaaatgcccctaacgggaaaggg
ttatcgctgggcaaactgcgctcaacggtcaatttaagtacgtccgttattgattccccc
gagccgactcaggtatccaaacctgttgaagtagtacttgataccctgcccgaaaaagac
ctgcccgtgacggtggaggcattgaaagaggcctgggctgaattttcccgaatgcgccaa
caaaatggcggcgcggtaagtgagcagatcatgcttaaccgtgattttacgtttgaggac
atgaccattgaattggtgttggacaacgggcatcaggaaacattgctcaatgaagttaaa
ccgacgctgttaggttatctgcgccgagcccttcaaaatcgtcagctacagatcgtccat
cgcattgctcaggatgacggcaagcgtaaagcctatacgccgcaggagaaatttaacgtc
ctcgccgagcgcaatcccgccctctttgacttgcagcggctgctggggctggaggttgat
ttttag
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