Runella slithyformis: Runsl_5404
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Entry
Runsl_5404 CDS
T01553
Name
(GenBank) CMP/dCMP deaminase zinc-binding protein
KO
K01493
dCMP deaminase [EC:
3.5.4.12
]
Organism
rsi
Runella slithyformis
Pathway
rsi00240
Pyrimidine metabolism
rsi01100
Metabolic pathways
rsi01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
rsi00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
Runsl_5404
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
rsi02044
]
Runsl_5404
Enzymes [BR:
rsi01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.12 dCMP deaminase
Runsl_5404
Secretion system [BR:
rsi02044
]
Type II secretion system
Competence-related DNA transformation transporter (DNA-T) core components
Runsl_5404
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
Bd3614-deam
APOBEC_N
SNAD4
APOBEC2
NAD1
APOBEC4_like
RNA_bind
Motif
Other DBs
NCBI-ProteinID:
AEI51695
UniProt:
A0A7U3ZQU7
LinkDB
All DBs
Position
complement(6271480..6271965)
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AA seq
161 aa
AA seq
DB search
MRPAFDDIFMELAQNLARRSHCIKAQVGSVLTKDTRIISIGYNGPPSGTHNCDDEFPETG
CPRDSKGSCSLALHAEQNAILYAVKNGANLEGTTLYVTLSPCIACARVIFTMKIKRVIYL
NSYAEYKGIGIDEGVEFLRKFGVEVERYLPKESAEGQLPSE
NT seq
486 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcctgcttttgatgatatatttatggaattggcccaaaatctggcgcggcggtca
cactgcatcaaagcgcaggttgggtcggtcctcaccaaagatacacggattatttcaatc
ggatacaatggcccgccctccggaactcacaattgtgacgatgaatttcccgaaaccggt
tgcccgcgtgattctaaaggaagctgctcactggcgttacatgctgagcagaacgcgatt
ttgtacgcggtcaaaaacggggcaaatctggaaggaaccacattgtacgttacgctttcg
ccctgtattgcctgcgcacgggtcatttttacgatgaagattaaacgcgtcatttaccta
aactcttacgccgaatacaaagggatcggcatcgatgaaggagtagaatttctgcgaaaa
tttggtgttgaagtggaacgttacctgccgaaagagagtgccgaaggtcaattgccttct
gaataa
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integrated database retrieval system
