Runella slithyformis: Runsl_5410
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Entry
Runsl_5410 CDS
T01553
Name
(GenBank) OmpA/MotB domain protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
rsi
Runella slithyformis
Brite
KEGG Orthology (KO) [BR:
rsi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rsi02000
]
Runsl_5410
Transporters [BR:
rsi02000
]
Other transporters
Pores ion channels [TC:
1
]
Runsl_5410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
SNase
Motif
Other DBs
NCBI-ProteinID:
AEI51701
UniProt:
A0A7U4E8H2
LinkDB
All DBs
Position
complement(6276745..6277638)
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AA seq
297 aa
AA seq
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MASGVKMLAWILLVGWMGGSAYWHVCKIKLLCDGPVEAGPPTAAAYTIPALNIADGNSLN
LSSAMNFGFKKSMPEPNYANVKKELDSLAAYLKANATRKLTITGLYSSIEQNTGSFADLG
LARAEALKEYLVQAGVPGGQLTTASKLVELIFSTEDSTHGMEFGFDSLLIPKTEEALAAA
EKYENLFKPMDLYFKTAKADYIKTPENEKFITEAVRYLTANTDKKLSLTGHTDNDGTDVT
NIKLSKNRANSIKALLIQRGIAESQLVTDAKGESQPKATNDTPEGRKANRRVSIIVQ
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaggtgtcaaaatgcttgcgtggattttgctcgttggctggatgggtggatct
gcttactggcatgtttgtaaaatcaaattgttgtgcgatggtcctgtggaggcagggcct
ccaactgctgccgcttatactattcctgcactcaacattgcagatggaaatagtctgaat
ttgtcatcggcgatgaattttggctttaaaaagtcaatgcccgaacctaattatgcaaat
gttaaaaaagaactcgactcattggcggcgtatttgaaggcaaatgccacccgtaaactt
accattacggggctttattcgtccatcgaacagaataccggttcatttgctgatctgggc
ctggcccgcgcggaggcactgaaggaatacctcgttcaggcaggtgttcccggcggtcaa
ttaactaccgcaagtaaacttgtagagttaattttcagtaccgaggattcaacacacggc
atggagtttggcttcgacagtttattgattccaaaaacggaagaagctcttgcggccgcc
gagaaatacgagaatttatttaaacccatggatctgtattttaaaacggccaaagcggat
tacatcaaaacgcccgaaaatgaaaaattcatcacagaagcggtaagatacctgaccgcc
aatacagacaaaaagctctctctgacggggcataccgataatgacggaacggatgttacg
aacatcaaactttctaaaaatcgggctaatagtataaaggcattgttgatacaaagaggg
atagccgaatcacaactggtcacagatgccaaaggagagtcacagcccaaagcgaccaat
gatacccccgaaggtcgtaaagctaatcggcgcgtgagcatcatcgtgcaatag
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