Runella slithyformis: Runsl_5449
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Entry
Runsl_5449 CDS
T01553
Name
(GenBank) DNA replication and repair protein recF
KO
K03629
DNA replication and repair protein RecF
Organism
rsi
Runella slithyformis
Pathway
rsi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rsi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Runsl_5449
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsi03400
]
Runsl_5449
DNA repair and recombination proteins [BR:
rsi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Runsl_5449
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
AAA_27
AAA_29
SbcC_Walker_B
DUF2326
ABC_tran
DUF8684
NACHT
Motif
Other DBs
NCBI-ProteinID:
AEI51740
UniProt:
A0A7U3ZQX7
LinkDB
All DBs
Position
complement(6314430..6315530)
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AA seq
366 aa
AA seq
DB search
MPQLYLEKLHLTYFRNYEEGRFEFSPGLNCIVGENGSGKTNLLDAIYWLGLTKSAFQVQD
AFSIRHEADFMLIDGVFRKNFREIQITCSLQRGQRKVMLSDKKPYERISDHIGEFPIVLV
APNDTDLVREGSEERRRFFDGVLSQLDQLYLQDLLQYNKLLAQRNSLLKIFYERHYVDDV
LLDTYDESLIALANRIFDRRQRFLLEFEPLVQQYYGFLGESREAVAVLYESEMEDLQFRE
HFRRHRPRDLQTQRTYMGAHKDDFRFEMGEVALKKFGSQGQQKSFVLALKLAQFELLSVE
KELKPLLLLDDIFDKLDDRRIQKLIELIENGTFGQVFLTDARPERTRDLLRDIKAEVKFF
EINSEG
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgccacagctatacttagaaaaactccatttgacgtacttcaggaattatgaagagggg
cgttttgagtttagtcccgggctcaattgcatcgtgggggagaatggatccggaaaaacc
aacctgctggatgctatttactggctggggctgaccaagagcgcgtttcaggtgcaggat
gcgttcagtatccggcacgaggctgattttatgcttattgacggagtttttcgcaaaaat
ttccgggagatacagatcacctgcagcctgcaacgcggccagcgaaaagtgatgctgtct
gacaaaaaaccgtacgagcgcatcagtgatcacatcggagaatttccgatcgtactggtg
gcacccaacgacaccgatctggtgcgggaaggcagtgaagagcgtcggcgcttttttgac
ggcgtactgtcccaactggaccaattgtatttgcaggatctgcttcaatacaataaactg
ctggcgcagcgcaacagccttctgaagattttttacgagcgtcattacgttgatgatgtg
ctattggacacgtatgacgaatcactcattgcgctggccaaccgtatctttgaccgaaga
cagcgatttttgctcgaatttgaacctttggtgcagcagtattacggttttttgggggag
agccgggaagcggtagctgtgctgtatgaatctgaaatggaagacttgcaattcagggaa
catttccgtcgccatcggccacgtgatctgcaaacgcaacgtacctacatgggtgcgcac
aaagatgattttcggtttgaaatgggagaggttgccctgaaaaaattcggttcgcaggga
caacagaagtcgtttgtgctggcgctcaaattggcccagtttgagttgttatcggtcgaa
aaagagttgaagccattgttgctgttggacgatatcttcgataagttggatgaccgtcgc
atccaaaaactcattgaactcattgaaaacggtaccttcggtcaggtattcctaaccgat
gcccgccccgagcgaacgcgggatttgttgagagatatcaaagcggaggtaaagtttttt
gagattaattctgaaggataa
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