Runella slithyformis: Runsl_5517
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Entry
Runsl_5517 CDS
T01553
Name
(GenBank) 3-hydroxybutyryl-CoA epimerase
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
rsi
Runella slithyformis
Pathway
rsi00071
Fatty acid degradation
rsi00280
Valine, leucine and isoleucine degradation
rsi00310
Lysine degradation
rsi00362
Benzoate degradation
rsi00380
Tryptophan metabolism
rsi00410
beta-Alanine metabolism
rsi00640
Propanoate metabolism
rsi00650
Butanoate metabolism
rsi00907
Pinene, camphor and geraniol degradation
rsi00930
Caprolactam degradation
rsi01100
Metabolic pathways
rsi01110
Biosynthesis of secondary metabolites
rsi01120
Microbial metabolism in diverse environments
rsi01200
Carbon metabolism
rsi01212
Fatty acid metabolism
Module
rsi_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
rsi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
Runsl_5517
00650 Butanoate metabolism
Runsl_5517
09103 Lipid metabolism
00071 Fatty acid degradation
Runsl_5517
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Runsl_5517
00310 Lysine degradation
Runsl_5517
00380 Tryptophan metabolism
Runsl_5517
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
Runsl_5517
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
Runsl_5517
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Runsl_5517
00930 Caprolactam degradation
Runsl_5517
Enzymes [BR:
rsi01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
Runsl_5517
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
Runsl_5517
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
Runsl_5517
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
2-Hacid_dh_C
F420_oxidored
Motif
Other DBs
NCBI-ProteinID:
AEI51807
UniProt:
A0A7U3ZR32
LinkDB
All DBs
Position
complement(6396931..6399099)
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AA seq
722 aa
AA seq
DB search
MTINCTTNNNIAILSWNMTGSPMNVLNDDSVPAFAEALEKAYSDAEVKGIIITSDKPEFV
AGADLKMILRNQGENPAEILKISVELNRLFRKIETNGKPVVAAINGTALGGGLEICLACH
YRVALDNPKTKLGLPEVKVGLLPGGGGTQRLPRMIGMQAALPLMLEGKEMTPKEALGLGI
VDAVAATREEMLEKAASWIAANPNPVKPWDEVNKKTGKIQAKDNYKVPNGAVLSPVGMQT
FTVGTAMMMDKSKGNYPAAQHIMSCVYEGLLVNIDRGIVIESRHFVQVATSKVAGNLIRT
MFLGLNEANKGASRPKDIPKTDVKKLGVLGAGMMGAGIAYVSAVAGIEVVLKDVSAEAAE
KGKDYARTLLKKAVERGKMDTLTAEGILDRIKPTADTADLQGSELIIEAVFENRDLKATV
TQEAEPMLAAGGVFGSNTSTLPITGLADASANPANFVGIHFFSPVDKMMLVELIVGKETS
DYALAVAVDFTRKIRKTPIVVNDSRGFYTSRCFGTYTSEGMELLKDGVSPVLIENAGKLA
GMPVGPLAVTDEVALDLVYKISAQAVKDGVLADTDTSYQIGKRFTEMGRLGKKAKAGFYD
YPEGGQKQLWAGLTELFPVVTVQPSLEEVKTRLLYRQALETVRCYEEGVIRTKLDADLGS
ILAWGFPPYTGGTLSFVDFVGINTFVTTLDRLADTYGERFRPTQKLREMAAEGVGFSAKK
QS
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgactatcaactgcacaaccaataataacatagccatcctgagctggaacatgaccggc
tcacccatgaatgtacttaacgacgactccgtccctgcctttgcggaagcgctggaaaaa
gcgtacagcgatgcggaggtcaagggtattattatcacctccgataagcccgaatttgtg
gccggagcggatctgaagatgatcttacggaatcagggcgaaaatccggccgaaatattg
aagatatcggtggagctcaatcggctttttcgaaagatcgaaaccaatggtaaacccgtc
gtggcggccatcaacgggacggctttgggcggagggttggagatatgtttggcgtgccat
tatcgggtggcgctcgacaatcccaagacgaaactcggtctccccgaagtaaaagtgggc
ctgctgcccggtggcggcggtacgcagcgattgccccgaatgatcggaatgcaggcggct
ttgccgttgatgctggagggcaaagaaatgacccccaaagaagcattggggctgggtatc
gtggatgccgtggctgcaacgcgggaagagatgctggaaaaggccgcttcctggattgcc
gccaatcccaaccctgttaagccatgggatgaggtcaataagaaaacgggtaaaattcag
gccaaagacaattataaagtacccaatggcgcggtattgagcccggtcggaatgcagacc
tttacggtaggtacggccatgatgatggataagtccaaagggaattatcccgctgcgcaa
cacatcatgtcgtgtgtatatgaaggactgttggtcaatatcgaccgaggcattgtgatc
gaatcgcggcattttgtgcaggtagccacctccaaagtagcaggaaatctgattcggacc
atgtttctgggcctgaacgaagccaataaaggagcaagtcggcccaaagatattccgaaa
accgacgtaaagaagctgggtgttctgggggccggaatgatgggcgcaggcattgcgtac
gtgagtgccgtggcgggcattgaggtagtactgaaagatgtcagtgcggaagccgccgaa
aagggaaaagattacgcgcggacattgctgaaaaaagccgtcgaacgcgggaaaatggat
actctcaccgccgaaggtattttggatcgtatcaagccaacggccgataccgctgattta
cagggaagtgaactgatcattgaagcggtttttgaaaaccgtgatctcaaggctaccgtt
acccaagaagccgagccgatgctcgccgcaggcggggtgtttggctccaatacatccacc
ctgcccattaccggcttagccgacgcttcggcaaatcccgccaattttgtgggaatccac
ttcttttcacccgttgataaaatgatgttggtagagctgatcgtgggcaaagaaacgtcc
gattatgctttggctgtcgcggtagactttacccgtaagatccgaaaaacaccgatcgtg
gtcaatgactcgcggggattttatacatcccgctgttttgggacctatacttccgaagga
atggaattgctcaaagacggcgtgagtccggtattgatcgaaaacgccggaaaattggca
ggaatgcccgtcggaccgttggcagttaccgacgaagtggcgctggatctggtgtataag
atttcggcgcaggcagtaaaagacggtgtgttggccgataccgacacgagctatcaaatc
ggtaagcggtttacggaaatgggccgtttgggcaagaaagccaaagccggattttatgac
taccctgaaggcggtcaaaagcaattgtgggccggattaacggaattatttcccgtggta
acggtacagccttcgttggaagaagtgaaaacgcgtttgctgtaccgccaggcacttgaa
accgttcgctgctacgaagaaggggttatccgtactaagttggatgcggatctgggctct
atattggcgtggggctttccaccgtatacgggcggcacactctcttttgtggattttgtg
ggcatcaatacctttgtaactaccctcgaccgtttggcggatacctacggcgagcgtttt
cgccccacgcagaaactgcgcgaaatggcggcggaaggtgttgggttttcagcaaagaag
cagtcttag
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