Runella slithyformis: Runsl_5564
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Entry
Runsl_5564 CDS
T01553
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
rsi
Runella slithyformis
Pathway
rsi03030
DNA replication
rsi03430
Mismatch repair
rsi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rsi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Runsl_5564
03430 Mismatch repair
Runsl_5564
03440 Homologous recombination
Runsl_5564
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rsi03032
]
Runsl_5564
03400 DNA repair and recombination proteins [BR:
rsi03400
]
Runsl_5564
Enzymes [BR:
rsi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Runsl_5564
DNA replication proteins [BR:
rsi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Runsl_5564
DNA repair and recombination proteins [BR:
rsi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Runsl_5564
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
DUF5097
Motif
Other DBs
NCBI-ProteinID:
AEI51854
UniProt:
A0A7U4E8Z9
LinkDB
All DBs
Position
complement(6465983..6467005)
Genome browser
AA seq
340 aa
AA seq
DB search
MPTFTPEQALKDIRQKKLHPLYFIHGDEPYYIDLLADAIEKVAVPEAEKGFNQFVLFGKE
TDIGTILNYARRFPFMAERQLVLVKEAQQISGFDSKEKTAFLEDYASRPPASTILVLCFQ
GNFDMRKSLPKVFERHGAMIQSKKMYDNKLPDWVGEYARSLGTKISIKAIQMLVENIGND
LKRITSEIDKILLNLTASEEITAAIVEKYVGISKEYNVFELQKALTQRDILKSNRIANYL
AANTKDNPLPQVLIILYNFFSKVLIVHGTPDKSEGNLASVLGVNPFFVKDYLSTARQYSL
GHVVNVIKAIRRADNASKGIESGSVNEEAILKELIFRILH
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgcccactttcacgcccgagcaagccctcaaagatattcgccaaaaaaagctgcatccg
ctctactttattcatggtgatgagccttactatattgatctcttggccgatgccatcgaa
aaagtcgcggtaccggaggctgaaaaaggatttaatcagtttgtattgtttggcaaagaa
accgacatcggcaccattctcaactacgcgcgacggtttccgttcatggccgagcgccaa
ttggtattggtcaaagaagcgcagcagataagcggctttgattcgaaagaaaaaacggca
tttttggaagattacgcttcccgtccgcccgcttccacgattttggtgctgtgttttcag
ggcaatttcgacatgcgcaaatcgctgccaaaagtctttgaaaggcacggggccatgatt
cagagcaaaaaaatgtacgacaacaaactgcccgattgggtaggggagtacgcccgaagc
ttagggactaaaatcagcatcaaagccattcaaatgttggtcgaaaatattggaaacgac
ctcaagcgcatcacgagcgagatagacaagatactgctcaacctcacggcgagtgaagaa
attacggcggcgatcgtggagaaatacgtgggcatcagcaaagaatacaatgtgtttgaa
ctccaaaaagcactcacgcagcgggatattctgaaatccaaccgcatcgctaactacctg
gcggccaacaccaaagacaatcctttgccgcaggtattaattatactctacaattttttc
agtaaggtgctgatcgttcacggaacccccgacaaatcagaggggaatctggcgtcggtg
ctgggggttaatcctttttttgtgaaggactatctttccacggcccgtcaatattcgttg
gggcacgtcgtcaatgtcatcaaagccattcgccgcgccgataacgcctccaaaggcatt
gaatcaggaagtgtgaacgaagaagctattttgaaagaattgatattcaggatattgcat
tga
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