Runella slithyformis: Runsl_5670
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Entry
Runsl_5670 CDS
T01553
Name
(GenBank) TonB-dependent receptor
KO
K16092
vitamin B12 transporter
Organism
rsi
Runella slithyformis
Brite
KEGG Orthology (KO) [BR:
rsi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rsi02000
]
Runsl_5670
Transporters [BR:
rsi02000
]
Other transporters
Pores ion channels [TC:
1
]
Runsl_5670
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
AEI51959
UniProt:
A0A7U4E926
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All DBs
Position
pRUNSL01:complement(26568..28820)
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AA seq
750 aa
AA seq
DB search
MRFFTVFILCIASVSSSWAQKTDSTAFSKTLEEVTVTSSRMALSARQLPQKIEVISNRDI
ELTPATDIADLLKKLTSLNIVQYPHGFSYVNLRGFAPNTFHGSNSIQPETSVMINGRPAG
TVNIAVLDRSSIERIEVLKGPSAAMYGANTMGGVVNIITKKSKGKIGGNAHLGYGTWNTL
EAGAGVGGKITKNLDFDLSGNFFNRGSNYKIGKGNLFRNAFGWRNSTVTALDQTTLDTPD
NVYDGITREFTQMQNYSAMLRLGYQISKNWRVDALHQRFATTKLYTIGDMRTINRDQGER
SYTTSEISLTGKVGAHNLLAKAYISNEQVKTFPFFNVTTGQEFTPYQSYESNVDYKGVQV
QDDFKLSDKFRLAFGADYYEAATALRNWNAPTAATGNVPQERAATSPNGLIKDLGVFAQA
HLTLLNDRLILNPSFRTDFVSYSMLRSFGLEDKTRIRDESRTIYSPNLGIQINLTKALAI
HANAGRAFRYAVANQIAGYFETFTTTNPARVNVTLGNPDLQNENSVTWETGIRFGKAEKG
FYVDATYFNTNVNDRIITVSDAAKVNTDWQALDGKTYKVASYRTFANANYSKFAGLELDG
YYDFGAFSQFQKSYRLFFNATKMLAYDDYVTGTTPSMPDTKSKARQVADLSVGGGFEYDD
MKRFSVRLSGRYIGVREYVNFNDVVSPQKFRSQLVEYPPHFTLDLAANYTLYKNHTVSLR
IQNLTDENFYEIRYQPMPGRNTSLRYTFRF
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgagattttttacagtattcatcctctgtatagcaagtgtgagtagctcatgggcgcaa
aaaacggactccaccgctttctcaaaaacattagaagaagtaacggtaacgtcgagtcgt
atggcgttgtcggcaaggcagttgccccaaaaaatagaagtcatttccaatcgggacatt
gagctgacacccgccaccgacatagcagacctattaaaaaaactgacctctctaaatatc
gttcagtacccgcatgggttctcatacgtgaatctgagagggtttgcccccaataccttt
catgggtccaattcgattcagcccgaaacctccgtaatgatcaatggccgccctgcgggt
acagtaaatattgcggttttggacaggagttcgattgagcgtattgaagtactcaaagga
ccttcggcagccatgtatggagccaataccatggggggggtggtgaatatcatcaccaaa
aaatccaaaggtaaaattggcggaaatgcacacttgggctatggtacttggaatacactt
gaagcaggggccggcgtaggtggcaaaatcacaaaaaatttagattttgacttgtcaggt
aatttttttaatcgagggagcaattacaaaataggaaaaggcaacctcttccgaaatgcc
tttggctggcgcaactcaaccgttacggcgctcgaccaaactaccctcgatacgcccgat
aatgtctatgacgggattacacgtgaatttacgcaaatgcagaactactcagcaatgctg
cggctgggatatcaaatcagtaaaaactggcgggtagatgcactgcatcaacgatttgcg
actaccaaactatataccattggtgacatgcggaccatcaaccgtgaccaaggagaacgc
agctatactacttccgaaatttcgctgacaggcaaggtaggtgcgcataatttgctggcc
aaagcctatatttctaacgaacaggtgaaaacctttcccttcttcaacgttactacgggg
caggaatttacaccgtaccaatcgtacgaaagcaacgtggactacaaaggtgtacaggta
caggatgattttaagttgtctgacaagtttaggctggcttttggcgcagactattatgaa
gcagccactgccctcagaaattggaacgctccaacggctgcaacgggcaacgttccgcag
gaaagggctgccaccagccccaatggcctcatcaaagatctgggcgtgtttgcacaagct
caccttactttactcaacgaccgtctgattcttaaccccagttttcgaaccgattttgtg
agttattcgatgctcagaagttttggtttggaagacaaaacacgcatcagagatgaaagc
agaacgatttacagccctaatctgggcatacaaatcaacctgaccaaagccctggccatc
cacgccaatgcagggcgggcgtttcggtacgcagtggccaaccaaattgcaggttatttt
gaaaccttcaccacgaccaaccccgccagggtaaatgtgactttgggtaatcctgacttg
caaaatgaaaatagcgttacgtgggaaacgggcatacgatttggcaaagccgagaaagga
ttttacgtagatgccacttattttaatacgaatgtcaatgaccgtatcatcacggtttcg
gatgcggccaaagtaaatacagattggcaggcgttggatggaaaaacctacaaagtggcc
tcttaccgtacttttgccaatgcaaactattcaaaatttgcgggtttggagttagatggc
tactatgattttggggcgtttagtcagttccaaaaatcatatcgcctgttttttaacgct
accaagatgcttgcctacgatgattacgtaaccggcaccactccatctatgcccgacacc
aagtcaaaagccagacaggtggctgatttgagcgtgggcggtggctttgagtatgacgac
atgaagcgcttttcggtgaggctgtcagggcgatacattggcgtgcgtgaatatgtgaat
ttcaacgacgtggtaagcccccagaagtttagaagtcagttagtggagtatccaccgcat
ttcacgctggatttggcagccaattataccctttacaaaaaccatacggtatcattgaga
atacagaacctcaccgacgagaatttctatgagattcgttaccaacccatgcccggccga
aacacctcattgagatatactttccgtttttga
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