Runella slithyformis: Runsl_5691
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Entry
Runsl_5691 CDS
T01553
Name
(GenBank) RagB/SusD domain-containing protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
rsi
Runella slithyformis
Brite
KEGG Orthology (KO) [BR:
rsi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rsi02000
]
Runsl_5691
Transporters [BR:
rsi02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Runsl_5691
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD-like_3
SusD_RagB
SusD-like_2
TPR_19
PH_9
Motif
Other DBs
NCBI-ProteinID:
AEI51980
UniProt:
A0A7U3ZRE6
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All DBs
Position
pRUNSL01:complement(53196..54656)
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AA seq
486 aa
AA seq
DB search
MKNIFKILAFILLLWGAGGCSDVLVEAPKAVAVETFYNTAAEVETAVNAAYQELRAVNGI
SGQLGAQVEAYTDYSYGRGSYQVLSDFQGLNSTNIPRTDEGWRLFYLSIRNANLVIQNAP
KGSRISQADIVKYVAEAKFLRAYNYFWLVRNWGGVPIRTEATLTEPNVKRSTAEEVYKLI
IADLKEAETNLPDKGAQVGRATKWAAKAALAEVYFTLNQYAEARDKADEIIKSGQFSLIP
VTVAADFDKVFGPTVVTSPEEIFYLKMTRQNNQGMYLAMFAHHPGTRLHGAGGFFAHYTD
SQTNPVYRTWDNNDLRKSYNWVSWNIGLGANSLLCKKFSDPLAPSGTAAGNDFPIYRYAD
VLLLYAEAACRAGNAPTAAAMEALNQVRRRAYGRPITTPSTVDFKLADYTAATFNDLVLR
ERGYETQYEGKRWLDLKRLGTPKLREIIKAATGKDVADKHLLWPIPVGELNFNTALDPCK
DQNPGY
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatatattcaaaatattggccttcatcctcctcctttggggggcggggggctgt
tctgacgttttggtggaggcccccaaagccgtggccgttgaaaccttttataacacagcg
gccgaagtggaaactgcagtgaacgctgcctatcaagaattgcgagcggtcaatggcatc
agcggtcagcttggtgcgcaggtggaagcttataccgattacagctacggacgtggcagc
tatcaggtattgagtgattttcagggccttaacagtaccaacattccccgtaccgacgag
ggttggcgattgttttacctcagcattcgcaacgccaacttagtgattcaaaatgccccc
aaaggctcacgtatcagtcaggccgatatcgtaaagtatgtggctgaagccaaattttta
cgggcgtacaattatttttggctggttaggaattggggcggcgttccgattcgaaccgaa
gccacgctcaccgagccaaacgtaaaacgcagtaccgccgaagaggtgtacaaattaatc
attgctgacctcaaagaagcagaaaccaacctccccgacaaaggtgctcaagtaggccgt
gccaccaaatgggccgccaaagcggctttggctgaggtgtattttaccttaaatcaatat
gccgaagcccgcgacaaagccgatgagatcattaaatcgggacagttttccctcatacct
gttactgttgccgccgattttgataaggtgttcggcccaaccgtagtgacttctcccgaa
gaaattttttacctgaaaatgacccgtcagaataatcagggtatgtatttggctatgttt
gcccatcacccgggcacccgtttgcacggagcgggcggtttttttgcccattataccgac
tctcaaaccaaccccgtttatagaacttgggataacaacgatttgcggaaaagctataat
tgggtgagttggaacattggattgggggcaaacagcctgttatgcaagaaattttcggac
cctctcgcgccttcgggtacggcagcgggcaatgattttccaatatatcgctacgccgat
gtgcttttactgtatgcagaagcagcctgccgggcaggtaatgcgccaacagctgccgcg
atggaagccctcaatcaggtacgtcgccgggcgtatggcagacccataacaactccctca
accgttgatttcaaattggcggattataccgctgctacgttcaacgatctggtattgagg
gaaagaggctatgaaacccaatacgaaggtaaacgctggctcgatctgaaaagattgggt
acgccaaaattgagagaaattatcaaagccgctacgggcaaagacgtggccgacaaacat
ttgctctggccgattccggtaggggaattgaattttaacaccgccctcgacccgtgcaaa
gatcaaaatccggggtactaa
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