Runella slithyformis: Runsl_5876
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Entry
Runsl_5876 CDS
T01553
Name
(GenBank) RHS repeat-associated core domain protein
Organism
rsi
Runella slithyformis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF6443
RHS_repeat
Fox-1_C
TEX19
DUF2380
Motif
Other DBs
NCBI-ProteinID:
AEI52172
UniProt:
A0A7U3ZRR6
LinkDB
All DBs
Position
pRUNSL03:complement(52880..59407)
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AA seq
2175 aa
AA seq
DB search
MKHIFFVLLLSFAVGKAWAFPVPALVDTASVQCSAEVITRGDTVYSTLEALDVACLQINT
QAGFVIEGGASYEAQIVDGSPNARIAAGSSATSLSILSPTAAGLGKFADIPVNYNNGLPQ
ITIPVTVVKEGELQLPVTLQYHASGVKVEEVAGWVGLNWTLSAGGVINRQVMGGPDESYG
GGSKGQVPQTSYYNTRTGYYADRGFRPFVPFLVCSPPASATPLAQNLRLGDEFLGSALGI
KDTEPDLFTFNVAGYTGKFYFDTLRQVHLIPQQDVKILVNFDNAGKQFSTWTLVTPDGTR
YHFGENNAYETSRTGAGSNAYPLSVAELRSSWLLTRVESADRQRNIYLEYTAEETAYRNL
APEKLMLEGGVYTGPTTADQRISTTRVYGRRLTKIAGSSTEVNFTANDLREDVDISSTAK
RLHEIQVKAVNEASCLRYRFTYDYWTSSLPSSGDGDAVINTGSDNDDLKRLRLLSVQEFS
CDNAQSKPAYVFSYAAGALPRRLSYQRDHWGYFNGRFNNNSLIPDDIAPGTLTTSIRTAD
ATLQKRGHLYQITYPTGGFMRFTMEAHTDKGGLRVQRIAEYFSPTDSVVRTFDYISPPLE
PFQRFYSKTLNTISSWGDFVQSGCPLTGGLFKSFSGTCYSGKLLIGSHLFAEAAGLTGQA
IAYSNVRVNYANSGSTTYRYLISQYTSLYGQSNEFPFVADNALYYIANGTLEAEEHYNQA
GQIQQKTVYTYSNPDPVTLATAPALRFATETCPPCPSGSACDLTTTVAFQRYNRQTVRQL
LLKKTEYHYNLDGSGAMTNATVYTYGNQHEQAVRTAMQNSRGDSLISETRFVRDLITSET
GSFTGAAYPLLLMRRRNMNAPVEQLIFIKKTGQDESQKKAIEGSYTLFAVIGSDTNLLKP
TVQYSLKVPDALSITPVSVSAGTLTYAVSQYEPRINFTYYTSSGSKGLLETERAEKGAPT
RYSYNAKRLLESRTEGFGTGQSQTTYYTHDALFGPTQIQNPRGLNTNFLYDGLGRLQQVK
DHATHLVKEYEYHYFSSSSNPINSVTEFTPRTAGSSLPGGSTNLQTTIGYVDGLGRALQS
VGKAAGPNGSNDIVAGAQTYDATGRLKRTYVPFPNTGSGSLAALPGSVHGDSAPYSENSL
FDDSPLKRVTKTYGPGQAWLTADKAVTVSYGTAGSEVPNITVTATGTAGTGNYENYTLFK
KIITNERNLATFEFSNKDGQLVERWTPDTTGGQYLKTAYVYDDLGRLRYVIQPQGRHTAT
AFNETDAVFTQYVFAYQYDRRGRVIRKHTPGGGWTNMVYDALDRVVLQQDAQQAAEATPK
WTFIKYDALGRTIQTGETATATTFTTLQQQVDADNDQFEVRNNVSTGYYYTQLTTPAVTA
AEVHSINYYDDYNDWRAGDLVFLSSFQSPYTTATGLLTGTAHRLLDGSNQWFYKAHYYNY
RDQIIQTRQRDYPSLAHYVQTDVDYNFVLQVTQQKRLYQKQGTSDVLVKESFDYDHVGRK
TRYQLGLNSSALDTVAQYQYDAVGRLTGKTIRPTRTYQRLGTGAATITRNAPPPANTNDI
ASQWIVLNPGFNTVAAGTYTAQIGTGSGTGTVQGLQTINYAYNIRDWLLSLNGGTLNGAE
NDLFAMKLDFEADGTYYDGNIRKQTWINSRDQQSRNYTYTYDLANRLKQAAYAGNGSENY
ALPLMQYDKNGNMTALQRNGKDGSGFGAIDRLSYTYAGNRLLYVNDAVTGNENTGDFRND
NTGTDDYSYWADGSLKTDKNKGISQIDYNFLNLPQQVQLSGNKQVAFVYDGNGRKIEKKT
TINGNPQTASYYLDGAIYEKQGAGTYGLYQIGHEEGRIVPINDTLRLEFSYTDQLGSLRL
SFRDSLASPQSGIYKAPVITQISQTDPWGLPLRGMEFENTTASSKFKFLNRESQAETGWI
DLMARQYDAQLGVFRSVDPVIEGQEHLSLYQYGWNNPILMSDPNGTCPFCPIIPYLPVIG
AAIGEGLVILAEATVTSGAIIGLTELIKSSGSGAGGAYSPGVSFAMSTSRPGELTTVLHS
SSSKTKGNNSASTSQSSSSASATPENPDKKNKNKNDAEGNFVLYEVKAKDGTPLKVGKAD
ADRTNAQGFPVRMKDSERKAKKEYPGATAEIIPGSQRRTTTGEMKQYEAETVRNKRASGN
KMPLNKEKDKRYNNQ
NT seq
6528 nt
NT seq
+upstream
nt +downstream
nt
atgaaacacattttttttgtcctgttgttgtctttcgccgtcggcaaagcgtgggcgttc
cccgtaccggccttggtagataccgcctcggtacaatgttctgccgaagtcatcacacgg
ggtgataccgtttacagtaccttagaggcattggatgtggcctgcctgcaaatcaacaca
caggcaggatttgtcatcgaaggcggagcgagctacgaagcacagatcgtagacggcagt
ccgaatgcccgaattgccgcaggaagttccgctacaagtttatccattctgtccccaacg
gcggcaggtttgggcaaatttgccgacattcccgtcaattataacaacggtttaccgcag
atcacgattcccgtgacagtcgttaaagaaggtgaactgcaattacccgtcacactgcaa
tatcatgcctcgggcgtgaaagtagaggaggtagccggttgggtaggattaaattggaca
ctcagcgcaggcggagtaattaaccgtcaggtgatgggaggtcctgatgaaagttacggc
ggaggaagtaaagggcaggtgcctcaaacaagctactacaatacccgcacgggatactat
gccgatcgcggttttcgtccgtttgttccatttttagtctgcagcccaccggcatctgca
acaccattggcacagaatctgcgtttgggtgatgagtttttaggatctgccctgggcatc
aaagataccgaacccgacctttttacctttaatgtcgcaggttacaccggaaaattttat
ttcgataccctgcggcaggttcacctgattcctcaacaggacgtaaagattctggtcaat
tttgacaatgccggcaaacagttcagtacgtggacacttgtaacgcctgatggtacccgt
taccactttggcgaaaacaacgcctatgaaacctcccgtaccggagccggctcgaatgcg
tatccgctgtcggtggcggaactgcgttcaagctggttgttgacgcgggtcgaaagtgcc
gaccgtcaacgcaatatttatttagaatacactgccgaagaaacggcttaccgtaacctt
gcccccgaaaaactgatgctggaaggcggggtatatacgggaccgacaacggcggatcaa
cgcatcagtacgacccgggtgtacggacgacgcctgaccaaaatagccggttcaagtacc
gaagtaaactttacggccaatgatctgcgggaagatgtggatataagcagcacggccaaa
cgccttcatgagattcaggtgaaagcggtcaatgaggcctcctgcctgcgttaccgattt
acctatgattattggacgagcagcctgccttcgtcgggcgacggggatgccgtcatcaat
acagggtcagacaacgatgacctcaaacgcctgcgcctgttgtcggtacaggaattcagt
tgtgataacgctcagagtaaaccggcctatgtattcagctacgcggccggtgcattgccc
cgtcgtttatcctaccagcgggatcactggggctattttaacgggcgtttcaataacaac
agcctgattcctgatgatattgcccccggcacattaacaacttccattcgcaccgccgat
gcgaccttgcagaaacggggccatctgtaccaaatcacgtatcccacgggtggattcatg
cgctttacgatggaagcgcacaccgacaaaggaggtttacgggtgcagcgcattgctgag
tatttttcgcccaccgacagcgtcgtgcgaacctttgattacatcagccccccgttggag
ccttttcaacgtttttattccaaaacgttaaatacaatatcgtcgtggggtgactttgtg
caaagcggttgcccgcttaccggcggactgttcaagtctttcagcggcacctgctattca
ggcaaattactgattgggtcacacctgtttgcggaggcagcgggattgaccggacaggcc
attgcctattccaacgttcgggtcaactatgccaacagcggttccaccacttatcggtac
ttaatcagccaatatacctccctttacggtcaaagcaacgagtttccctttgtggccgat
aatgcgctgtattacattgccaacggcaccctggaagccgaagagcactataatcaggca
gggcaaatccagcagaaaacagtttacacctacagcaaccccgatccggttacccttgct
actgctccggctctccgctttgcgaccgaaacctgtccgccctgtccatcgggttctgcc
tgtgacttaaccaccaccgtggcttttcagcggtataaccgccaaacggtgcgtcagctc
ctgttgaaaaaaacggagtatcactacaacttagacggcagcggggcaatgaccaacgct
acggtctacacttacggcaaccaacacgaacaggccgttcggacagcgatgcaaaacagc
cggggtgacagccttatcagcgagacccgttttgtaagggatctgattacgagcgaaacg
ggttcgtttacgggggctgcctatccgctgctgttgatgagaaggcgtaatatgaacgcg
cccgtggagcaacttatctttatcaaaaaaacgggacaggacgaaagtcagaaaaaagcc
attgagggcagttatactctttttgcggtgatcggcagtgataccaatctgctcaaaccg
actgtgcagtacagtttgaaagtgcccgatgcactgagcattacgcccgtgagcgtaagc
gcaggaacgcttacctacgccgtcagtcaatacgagccacggataaattttacttactac
acttcaagcggcagcaaagggctgttggaaaccgaaagggccgaaaaaggcgcacccacc
cgttattcgtataatgccaaacgattgcttgaaagccgtaccgaaggctttggcacagga
cagtcgcaaacgacctactacacccacgatgcgctgtttgggccgacgcaaattcagaat
ccacgcggtttaaatacgaattttctctacgacggtttgggtcgtctgcaacaggtcaaa
gaccatgcaacccatcttgtcaaagaatatgaataccactatttttcgtcttcttccaac
ccgatcaattccgttaccgaattcacgccccgtacagcaggcagttcactgcccggcggg
agtaccaatctgcaaacaacgatcggttatgtggatggattgggaagggctttgcaaagt
gtggggaaagcagcgggaccgaacggcagcaatgacattgtcgcaggggctcaaacctac
gatgctacggggcggctcaaacgtacttatgtgccttttcccaacaccggcagcggcagt
ttggcagctttaccgggcagtgtgcacggtgacagtgctccttattccgagaacagtctg
tttgatgattcccctttgaaacgcgtgaccaaaacctatggtcccgggcaggcgtggctc
acggccgacaaagccgtgaccgtgagctacggtacggcaggcagtgaagtgccgaacatt
acggtgacggctacaggaacggccggtaccggaaattacgaaaattataccctttttaag
aaaataatcaccaacgaacgaaaccttgcaaccttcgagttcagcaataaagacggtcag
ctcgtggaacgttggacccccgataccaccggcgggcagtacctgaaaaccgcttacgtc
tatgacgacttgggacgtttgaggtatgtgattcagccgcagggcagacataccgcaacg
gcttttaacgaaacggatgcggtgtttacccaatacgtgtttgcgtatcaatacgaccgc
cggggacgcgtcattcgcaaacacaccccgggcggaggttggaccaatatggtgtatgat
gccctggatcgggtggtgctgcaacaggatgcccaacaggccgcagaggccactcccaaa
tggacatttatcaagtatgatgcgttgggcagaacgatacaaacgggagagaccgccact
gcaacgacctttaccacgctgcaacagcaggtagacgcggacaatgatcagtttgaagtt
cgcaataacgtttcgaccggctattattatacccaattgacgacccccgccgtcactgct
gccgaagtacacagcatcaattactacgacgattataatgattggcgggcaggtgatctg
gtgtttttaagcagtttccaaagcccgtataccactgcaacgggacttctgacgggaacg
gcccatcgcttgctggatggctccaatcaatggttctacaaagcccattactacaactat
cgtgatcagatcattcaaacaaggcaacgggattatccttcattggcacactatgtgcaa
acggatgtggattataactttgtgctgcaggtcactcagcaaaagcgtctttatcaaaaa
cagggcacatcggatgtattggtcaaagaatccttcgactacgaccatgttgggagaaaa
acacgttatcagttgggactgaacagtagtgcacttgataccgttgcacaatatcaatac
gatgctgttggacgactgaccggtaaaaccattcgcccgacgcgcacttaccaacgattg
ggaacgggtgccgctaccatcacccgcaacgctccccctcctgccaataccaacgatatt
gcttctcaatggatcgtattgaatcccggatttaacacggttgccgccggcacctacacc
gcccaaatcggaacgggaagcggcacgggaacggtgcagggtttacagaccatcaactac
gcctacaatattcgtgattggttattaagcctcaatggcggaacactcaatggcgcagag
aatgatctgtttgccatgaagctggattttgaagcggacggcacttattacgatggtaat
attcgtaaacaaacgtggattaactctcgtgaccaacaatcccgaaattatacttatacc
tacgatttagccaataggctcaaacaggccgcttatgccggcaatggtagtgaaaactac
gctttgccgttgatgcaatatgataaaaacggcaacatgaccgccttgcagcgaaatggt
aaggacggcagcggttttggtgcaatcgaccgcctgagttatacctatgcgggcaatcga
ctcttatatgtgaacgatgccgtcaccggcaacgaaaacacgggggattttcgcaatgac
aataccggcaccgatgattacagttattgggccgatggcagcctgaaaactgacaaaaac
aaaggcatcagtcaaatagactacaattttctgaatttacctcagcaggtacagctctcg
ggcaataagcaggtagcttttgtgtatgacggcaatggccgaaaaatagagaagaagaca
accataaacggtaatcctcaaactgcttcctattatctggatggggctatctatgaaaag
cagggagcaggaacctatggattgtatcaaatcggccacgaagaagggcggatcgtgccg
attaatgacacgctgagactggaattcagttataccgatcaattgggaagtttgcgtttg
agcttccgggattcgttagcatctccccaatcgggtatttacaaagcccctgtgattaca
cagatttcgcaaaccgacccttggggtttgccactcaggggcatggaatttgagaatacg
acagcaagtagtaagtttaagtttttaaatcgggagagtcaagccgagacaggttggata
gacctgatggcgaggcaatacgatgctcagctaggtgtttttagaagcgtggatcctgtt
atagaggggcaggagcatttgagtttgtaccaatatgggtggaataaccctatattaatg
agcgacccgaatggcacttgccctttctgtccaatcattccctatttgcctgttattggt
gcagctataggagaaggcttagtcattttagcagaagctaccgtcacttcaggggcaatt
attggtttgacagagttaattaaatcttctgggtcaggtgcgggaggagcttacagcccc
ggggttagttttgcgatgtctaccagtcgccctggtgaattaacaacagtgttgcatagt
tcatcaagtaaaactaaagggaataatagtgcaagtacatcacaaagtagttcaagtgct
tctgctacacctgaaaaccccgacaaaaagaacaaaaataaaaatgatgccgaaggtaac
tttgtattatatgaggtaaaagctaaagatggaacacctttgaaagttggaaaagctgat
gcggatagaaccaatgcacaaggttttccagtaagaatgaaagacagcgagagaaaagca
aagaaagagtatccgggtgcaacggctgaaatcatacctggttctcaaagaagaactaca
actggcgaaatgaaacaatatgaggcagaaacagtaaggaataaaagggcaagtggcaat
aaaatgccattaaataaagaaaaagataaacgatataataatcaatga
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