Runella slithyformis: Runsl_5902
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Entry
Runsl_5902 CDS
T01553
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rsi
Runella slithyformis
Pathway
rsi03420
Nucleotide excision repair
rsi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rsi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Runsl_5902
03430 Mismatch repair
Runsl_5902
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsi03400
]
Runsl_5902
Enzymes [BR:
rsi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Runsl_5902
DNA repair and recombination proteins [BR:
rsi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Runsl_5902
MMR (mismatch excision repair)
Other MMR factors
Runsl_5902
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
ResIII
Viral_helicase1
ATPase_2
AAA_16
UvrD_C_2
AAA_22
AAA_7
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
AEI52039
UniProt:
A0A7U3ZRI7
LinkDB
All DBs
Position
pRUNSL02:complement(14664..17132)
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AA seq
822 aa
AA seq
DB search
MKEKLLLWLKGQQQTLDQIIYEAAFEYYQKNSVKANFDFELSICQEESFDLIKGKDLCYD
RLNTPFTYSLWYHARRVNTFLSFFADALLNTAESRIEIFDLGAGTGAIQWAVGLIISGMK
AIGMSTPKITVINIDTSPFMLLYGEKYLWRHFVEYYPFCKEPNMITKYSVVSWNNPENLT
LTNPWIASSYLFDMSDNKEEIAKGFDELVSTFKPINLLLITSNQDKKVAFLKELKQKLNN
EGYLTQGIYTQNHNLLFQGQLLKVSKLRQELAKKHGGKGMSNSATWDDMSFIGLALTKQQ
MMLSLQTGIKLFTVTERDRTKIKLSVDQLKASKPTGKPTVILGPAGCGKSVVLTERIKNI
VENHDYNPHLKILVTTFNKDLVRYLGDWLEQILDANKCKREFGKDFYGRPQQYSYFRFSN
SDKYNIYVLHFDVLPTKIGSVMAKDLKFKTYKGEIEQFHLDKLKEIADDLLTESKLNKKD
FESVCDPNFLFDEYHRIVYGLQCSTYKKYKVIERVGRGNPKLRTNSAKRKFVWDTLILYV
KFLKANNLDSFTLRRYRFLQKLNNPKVAFAKFDYILVDELQDCTIADYEIFYKLVKDSNN
IVLAGDLAQSIRLGTTSRVPRADDEMMKRFDRILLEGSYRLPFRISECVKGLSERINSKR
FKVGNNESGNVINPFKGAPPGARPLIIYGENWTETIQKLKEVIMAYKLYGFKSVSVFERD
DILHSKLILNGISATYETILKAKGLEKQCVIWSTRVPVDTEKEIDEFVYTILTRTSAVLI
IVLSSNIHPSYIDILKTFDRARLIYWDSSSKSKFLELCEVDN
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaaaacttttactatggcttaaagggcaacaacaaacccttgaccaaattatc
tatgaggcggcatttgaatattatcaaaaaaatagtgttaaagctaactttgattttgaa
ctatcaatttgccaagaagagagctttgacttaataaaagggaaagacctatgttatgat
agattaaacacgccatttacttactctctttggtatcatgcccgtagggtaaataccttc
ctttcattttttgctgatgcactgttgaacacagcagaatcccgtatagaaatatttgat
ttaggtgctggaacaggtgcaatacaatgggctgttgggttgattattagcggaatgaaa
gcgataggtatgagcacacctaagattaccgtaatcaacatagatacgagtccatttatg
ttgttatatggtgaaaaatatctgtggaggcattttgtggaatattatcctttttgcaaa
gaaccgaacatgattacaaaatactccgtagtatcatggaataatccagaaaatttaacc
cttactaacccttggattgcttcaagctatttatttgatatgtctgataacaaagaagag
atagccaaagggtttgatgaactcgtaagcacatttaaacctattaatctattgttaatc
acttcaaatcaggataagaaggtagcttttttgaaagaattgaagcaaaaactcaataat
gaaggctatctcacgcaaggtatttatacccaaaaccataacttgctatttcaggggcaa
ttgttaaaagtgtcaaaacttaggcaagaacttgctaaaaaacatggaggaaaagggatg
tcaaattctgcaacatgggatgatatgagttttattggtcttgctctaacaaagcaacag
atgatgctttcattacaaacgggaattaaactgtttactgtaactgaaagagatagaaca
aaaatcaaactaagtgtcgatcaattaaaagcctctaaaccaacgggaaaaccaacagta
attttagggccagctgggtgtggtaaaagtgttgttcttacagagcgcatcaaaaacatt
gttgaaaaccatgactacaacccccaccttaaaattttggttacaacctttaataaggat
cttgttcgatacttaggtgattggcttgaacaaattttggatgctaataagtgcaaacga
gagtttggcaaagatttttatggacgaccacagcaatacagctattttcggttcagcaat
agtgacaaatacaatatctatgtattgcactttgatgttttacccacaaaaataggaagc
gtcatggctaaggatttaaaattcaaaacctacaaaggtgagatagagcagtttcatctt
gataaactgaaagagatagcggatgatttattgactgaaagtaaattgaacaaaaaggat
tttgaaagtgtctgtgaccctaattttctttttgatgaatatcatcgtatagtttatgga
ctacaatgctcaacatataaaaagtacaaagttattgagagagttggtagaggaaatccg
aagctaagaacaaatagtgctaaacgtaagtttgtttgggacactttaattctttatgtt
aaatttctgaaagctaataacttagattcttttactcttaggcgttatcgttttttgcaa
aaactaaataacccaaaagttgcatttgcaaaatttgattatatcctcgtggatgagtta
caagattgtacgatagctgattatgaaattttttataagttagttaaagattccaataat
attgttttggcaggtgatttggctcaatcaattcgattaggaacaacatcgagggttccg
agagcagacgatgaaatgatgaaacgttttgatcgaattttattggaagggtcttatcga
ttaccttttagaattagcgaatgtgtcaaaggactttcagaaagaataaatagcaaacgt
tttaaagttggtaacaatgaaagtggtaatgtgataaatccattcaaaggagcgccgcca
ggtgccagaccacttattatttatggcgaaaattggactgaaaccattcaaaaattaaaa
gaggttattatggcttacaaattgtacggtttcaaatcagtttctgtttttgaaagagat
gatattttacattcaaaattgattctcaatggcatatcagctacttatgaaaccattttg
aaagcaaaagggcttgaaaaacagtgcgttatctggtcaacacgtgtaccagttgacaca
gaaaaggagatagatgaattcgtttatactatattgacaaggacatctgctgtactgatt
atagtattaagtagtaatatacatccatcatatatagatattttaaaaacttttgacaga
gcacgccttatttattgggatagtagctcaaaaagtaagtttcttgaactttgtgaggtt
gataattga
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