Runella slithyformis: Runsl_5927
Help
Entry
Runsl_5927 CDS
T01553
Name
(GenBank) heavy metal efflux pump, CzcA family
KO
K15726
heavy metal efflux system protein
Organism
rsi
Runella slithyformis
Brite
KEGG Orthology (KO) [BR:
rsi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rsi02000
]
Runsl_5927
Transporters [BR:
rsi02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Runsl_5927
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
OEP
RseA_C
Motif
Other DBs
NCBI-ProteinID:
AEI52063
UniProt:
A0A7U4E945
LinkDB
All DBs
Position
pRUNSL02:complement(43834..48174)
Genome browser
AA seq
1446 aa
AA seq
DB search
MLDKIIQFSIKNKFIIGLFTMALVLVGIYNLSRLPIDALPDITNNQVQVITNAPTLATQE
VEQFITYPIEQTMKTVPRIVEMRSLSRFGLSVITLVFEESVDIYWARTQISEKLKDAERQ
IPKGVGTPELAPISTGLGEIYQYVIYAKKGFENQYSASKLRSIQDWIVKPQLLGTPGIAE
VTTLGGSLKQYEIAVEPDRLKSMNITITDVFDALEKNNENTGGAYIDKQPYVYFIRALGM
VKSIPDIEKIVVKNNDGIPVLIRDVAKVQEGSALRYGAVTKDGKGEVVGGMVLMLKGENS
SAIVNRTKEKIEQIRKSLPEGIALEPFIDRTKLVNNAIGTVQTNLLEGALIVIFVLVLLL
GNWRAGLVVASVIPLALLFAVIMMNLFGVSGNLMSLGAIDFGLIVDGAVIIVEAVIHRLH
LNKEGRLTAQQMDEEVFGASSKIRSSAAFGEIIILIVYLPILALVGTEGKMFKPMAQTVT
FAILGAFILSLTYVPMASALFLSKTISHKKNISDKIIDTIYRFYQPVLDKALQMKALILG
ISVALFLVALFVFSRMGGEFIPTLEEGDYAINFRNANGSSLSMSIETSTKLEKILKAKFP
EVVEVVTKIGSAEIPTDPMPIESADMIIILKPKKEWTTTNDFYELADLMKEELEQIPGVG
FEVSQPIQMRFNELMTGVRSDIAIKIFGEDLEKLAATSTNAIGLIGGIEGVADIKDERIT
GMPQITVRYNPDKLALYGLNVGDLNKVVRTGFAGEVTGKVYEGERRYELVVRLDKDFRQD
ISNVKSIFVSLPNGNQIPLEQVAEVNIEQGPAQISRENGRRRIVIGLNVRGRDVKSVVNE
IQAKLDTKLKLPEGYYVTYGGQFENLVEANKRLSVAVPVALLLIFVLLFFTFNSVKQSLL
IFTAIPLSAIGGVFALWLRGMPFSISAGIGFIALFGVAVLNGIVLIGYFNQLKAEGWTDV
LERIKEGTKVRLRPVVMTAAVASMGFLPMALSNGAGAEVQKPLATVVIGGLLTASLLTLI
VLPILYLLLEKGIKAPKKINISSAIILIVLFLGGNVQAQTSLNLQQAIELGTKNNGLVQA
NELAVKLQNQLKPTAVELPKTNINAMLGQYNTRSFDQNFSISQGFSPFQFQAKRGLIKEY
VKGSELKLLATKYDIAFQIRQSWNTILYLTALNQLLQKQDEYLQTFVKAANLKFKTGESN
LLEKTTAETKQQELVQIKNQNEGLILGEKIKLESILNLNTDFILAENEFLPSKLLSSDST
LINQNPMLQMALQQIEIASASNKVEKALRKPDFSAGYFLQSLTGSQQVGDKAVYYNGVPR
FHGLTLGIGVPIFGGASKARIKASETDIQIQQKNAEYLKNQLNSQLLQQIQEQRVNQALL
DYYVQTALPNAEIITKNATKAYQSGEAGYVEYLQGLETVLSIQRNYLQAIHNLNQNLINI
QYLLNN
NT seq
4341 nt
NT seq
+upstream
nt +downstream
nt
atgttagataaaatcattcaattctcaatcaaaaataagtttatcataggcttatttaca
atggcactggtgttggtgggtatttacaacctcagccgactgccaattgatgccctgcct
gatattactaataatcaggttcaggttattacgaatgcccctaccttagctacgcaagaa
gtggaacagttcattacctatcccattgaacaaacgatgaaaaccgttccacgcatcgta
gaaatgcgttcgcttagtcgttttggactgagtgtgattaccttggtttttgaagaaagt
gtggacatttattgggcaagaactcaaatcagtgaaaaactaaaagatgccgaaaggcaa
attccaaaaggcgtaggcacacccgaattagcccccatcagtacgggtttgggcgaaatt
tatcaatatgtgatttatgccaaaaagggctttgaaaatcagtatagtgcttccaaacta
cgaagtattcaagactggattgtcaaacctcaattgctgggtacaccaggcattgccgaa
gtgacaaccttgggcggtagtctcaaacaatacgaaattgcagttgagcctgaccgatta
aaaagcatgaacatcaccattactgatgtttttgatgccctcgaaaaaaacaacgaaaat
accggtggtgcttacatagacaaacaaccatacgtctattttatcagggcattgggaatg
gtgaaatctattcctgatatcgaaaaaatagtagtaaaaaacaacgatggtattccagtt
ttgattcgagatgtagcaaaagtgcaggaaggttcagctttgcgatatggtgcagttacc
aaagacggcaaaggcgaggtagtaggcggaatggtgctgatgctcaaaggcgaaaactcc
tctgcaatcgtgaatcgtaccaaagaaaaaattgagcaaatccgaaaatcattgcccgaa
ggcattgccttagaaccatttatagaccgtactaaattagtaaataatgccatcggaacg
gttcagacaaacctactcgaaggagctttgattgtcatttttgtcttggttttattgctt
ggcaactggcgtgcaggtttggtggtcgcctccgtaatacctttggcgttgctatttgcc
gtcattatgatgaatctatttggcgtaagtggcaacctgatgagtttaggcgctattgac
tttggattgattgtagatggagccgtcattattgtggaggccgttattcatcggctacac
ctgaataaagaagggcgattaactgctcaacagatggatgaggaggtttttggcgcatca
agcaaaattaggagtagtgcggcttttggcgaaatcatcatcttaattgtttatttaccc
attttggcgttggttggcaccgagggcaagatgtttaaacccatggctcaaacagttacg
tttgctattttgggggcttttattttgtcgcttacttacgttccaatggcctcagctttg
tttttgagcaaaacgattagtcataaaaagaacatttctgataaaatcattgatacgatc
taccgtttctaccaaccagtattggacaaagccctgcaaatgaaggctttaattttgggt
atctcggtcgctttgtttttggtcgctttgttcgtttttagcaggatgggtggtgaattt
atcccaaccttagaagaaggcgattatgctattaattttcgtaatgctaatggcagttcg
ttgagtatgagtattgaaacgtcaacgaaattagagaaaattcttaaagcaaaatttccc
gaagtggtggaagttgttacaaaaattggttcagccgaaattcccaccgacccaatgccc
atcgaatcggcggatatgattatcattctcaaacctaaaaaagaatggacaactaccaac
gatttctacgaattggcagatttgatgaaagaagaattggagcaaattcctggcgtaggc
tttgaagtgtcacaacccatacaaatgcgttttaatgagttgatgacgggtgttagaagc
gatattgccatcaagatttttggtgaagatttagaaaaattggccgctacctctactaat
gccattggcttaattggaggcattgaaggggtagcagatataaaagatgaacggatcaca
ggaatgcctcaaatcacggtgcggtataatcctgacaaattggctttatatggtttgaat
gtaggtgacttaaacaaagttgtcagaacaggttttgctggcgaagtcacgggtaaagtc
tatgaaggcgaaagacgatacgaattggttgtacgattggacaaagatttccgacaggat
atttctaacgtaaaaagcatttttgtgagcctgccgaatggcaatcagattccattggaa
caggtagcggaggtaaatattgagcaagggcctgcccaaatcagcagagaaaatggcaga
agaagaatcgtaattgggttgaatgttcgtggtcgtgatgtcaaaagtgtggtaaacgaa
attcaggcgaaattagacactaaactcaaactacccgaaggttattacgtaacctacggc
ggacaattcgagaatttagtagaggctaacaaacgcctttcggtggctgttccagtggcg
ttactcttaatctttgtattacttttctttactttcaactcggtcaagcaatctttattg
atttttacagccattccgctttcggctattggtggcgtatttgcgctttggttgcgtgga
atgccatttagtatttcggcaggaattggctttatagccttgtttggggtagcggttttg
aacggaattgtgctgattggctatttcaatcaactcaaagccgaaggttggactgatgtt
ttagagagaatcaaagaaggcacaaaagtacggctacggcctgtggtgatgacggcggcg
gtagcttcgatgggttttttacccatggcattaagcaacggcgctggggcagaagttcaa
aaacccttggcaacggttgtcattggaggcttattaaccgcctctttgcttacccttatc
gtgttgccaattttatatttattgcttgaaaaagggataaaggcccctaagaaaataaat
atttcatcggctataatcctaatcgtgttgtttctgggcggaaatgtgcaggctcagacc
tctctcaatcttcaacaagccattgaattgggtactaaaaacaatggccttgtacaagcc
aatgagctggctgtcaagctacaaaatcagctaaaaccgacggcggtcgaattgcccaaa
accaatattaacgccatgcttgggcaatataatacccgtagtttcgaccaaaattttagc
atttcgcaaggatttagtccttttcagtttcaagccaaacgaggtttaattaaagaatac
gtcaaaggtagcgaactaaaattgttggctaccaaatatgacattgcctttcagattcgg
cagtcttggaataccattttgtatctgactgccttgaatcaattacttcaaaagcaagat
gaatatttacaaacattcgtcaaagcggcaaaccttaaattcaaaacaggtgagagtaat
ctgttagaaaaaaccactgccgaaaccaaacaacaggagttggtgcaaattaaaaatcaa
aacgaaggcttgattttgggtgaaaaaatcaaattggaaagcattttgaatctgaatacc
gactttatacttgccgaaaatgaatttttgccctcaaaactcctcagtagcgattcgacg
cttatcaatcaaaacccgatgctacaaatggcgttgcaacaaattgaaatagcctcggca
agcaataaagtggagaaagccttgcgaaaacctgatttttcagcaggctattttctgcaa
tcgctcacaggaagtcagcaagttggcgacaaagcggtttattacaacggcgtaccccgt
tttcacggactaacattgggtataggtgtaccgattttcgggggagcttccaaagcacgt
atcaaagcatcagaaacggatattcagatccaacaaaaaaatgctgaatacctcaaaaat
caactcaatagccaacttttgcagcaaattcaagagcaaagggttaatcaggctctgctt
gattattatgttcaaacggctttgcccaatgccgaaatcatcactaaaaatgctacaaag
gcttaccagagtggcgaagcgggttatgtagagtacctgcaaggattagaaacggtgttg
agtattcaacggaattacttgcaagccattcataatctgaaccagaacctcatcaatatt
cagtatttgttgaacaactaa
DBGET
integrated database retrieval system
